| Previous changeset 7:c42bf6424ba4 (2024-03-19) Next changeset 9:bec8f57c9d8e (2025-07-01) |
|
Commit message:
planemo upload for repository https://github.com/genouest/galaxy-tools/tree/master/tools/braker commit d6f7fd50bc001327f69d5391d236aecba0eb64b3 |
|
modified:
braker3.xml |
| b |
| diff -r c42bf6424ba4 -r a9b0b926e133 braker3.xml --- a/braker3.xml Tue Mar 19 09:00:36 2024 +0000 +++ b/braker3.xml Thu Jan 16 10:40:43 2025 +0000 |
| b |
| @@ -112,7 +112,7 @@ <section name="advanced" expanded="false" title="Advanced"> <!--param argument="-\-UTR" type="boolean" checked="false" truevalue="-\-UTR=on" falsevalue="" label="" help="Experimental, requires RNASeq data (bam) and a softmasked genome" /--> - <param argument="--filterOutShort" type="boolean" checked="false" truevalue="--filterOutShort" falsevalue="" label="Filter out too short traingin gene predicted by GeneMark-EX" /> + <param argument="--filterOutShort" type="boolean" checked="false" truevalue="--filterOutShort" falsevalue="" label="Filter out too short training gene predicted by GeneMark-EX" /> <param argument="--eval" type="data" format="gtf" optional="true" label="Reference set to evaluate predictions" help="using evaluation scripts from GaTech" /> <param argument="--eval_pseudo" type="data" format="gff3" optional="true" label="File with pseudogenes that will be excluded from accuracy evaluation" /> <param argument="--alternatives-from-evidence" type="boolean" checked="true" truevalue="--alternatives-from-evidence=true" falsevalue="--alternatives-from-evidence=false" label="Output alternative transcripts based on explicit evidence from hints"/> |