Repository 'magicblast'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/magicblast

Changeset 1:aea6702a3cd5 (2022-08-09)
Previous changeset 0:e6799e98c5fb (2022-04-05) Next changeset 2:34ac212ef95e (2022-10-31)
Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/blast commit 03f44b153a1a79a5e7304a2f73e9e9160923ee9b
modified:
macros.xml
magicblast.xml
test-data/blastdb.loc
b
diff -r e6799e98c5fb -r aea6702a3cd5 macros.xml
--- a/macros.xml Tue Apr 05 12:11:08 2022 +0000
+++ b/macros.xml Tue Aug 09 12:58:39 2022 +0000
b
@@ -1,6 +1,6 @@
 <macros>
     <token name="@TOOL_VERSION@">1.6.0</token>
-    <token name="@VERSION_SUFFIX@">0</token>
+    <token name="@VERSION_SUFFIX@">1</token>
     <token name="@PROFILE@">20.09</token>
     <xml name="requirements">
         <requirements>
b
diff -r e6799e98c5fb -r aea6702a3cd5 magicblast.xml
--- a/magicblast.xml Tue Apr 05 12:11:08 2022 +0000
+++ b/magicblast.xml Tue Aug 09 12:58:39 2022 +0000
b
@@ -30,7 +30,7 @@
 #if $db_opts.db_opts_selector == "histdb":
     -db '${os.path.join($db_opts.histdb.extra_files_path, "blastdb")}'
 #elif $db_opts.db_opts_selector == "db":
-    -db '${os.path.join($db_opts.database.fields.path, "blastdb")}'
+    -db '${db_opts.database.fields.path}'
 #else:
     #if $db_opts.subject.is_of_type('fasta.gz'):
         -subject <(gunzip -c '${$db_opts.subject}')
b
diff -r e6799e98c5fb -r aea6702a3cd5 test-data/blastdb.loc
--- a/test-data/blastdb.loc Tue Apr 05 12:11:08 2022 +0000
+++ b/test-data/blastdb.loc Tue Aug 09 12:58:39 2022 +0000
b
@@ -1,4 +1,4 @@
 # This file is just a placeholder since Galxy does
 # not yet suppoort uploading a BLAST database, which
 # is required for functional tests.
-phiX174 phiX174 ${__HERE__}/phiX174
+phiX174 phiX174 ${__HERE__}/phiX174/blastdb