Repository 'kinatest_fisher_test'
hg clone https://toolshed.g2.bx.psu.edu/repos/jfb/kinatest_fisher_test

Changeset 5:aff861ca6e2b (2019-01-14)
Previous changeset 4:76f8ac0fe858 (2019-01-14) Next changeset 6:eb89ff215fb8 (2020-02-05)
Commit message:
Uploaded
modified:
KT-ID fisher test/7-7-fisher-galaxy_working.R
b
diff -r 76f8ac0fe858 -r aff861ca6e2b KT-ID fisher test/7-7-fisher-galaxy_working.R
--- a/KT-ID fisher test/7-7-fisher-galaxy_working.R Mon Jan 14 15:19:26 2019 -0500
+++ b/KT-ID fisher test/7-7-fisher-galaxy_working.R Mon Jan 14 15:40:43 2019 -0500
[
@@ -658,10 +658,10 @@
 
 SetOfAAs<-matrix(data = SetOfAAs,ncol = 1)
 
-numberofY<-as.numeric(SubstrateBackgroundFrequency$Number.of.Y)
+numberofY<-as.numeric(SubstrateBackgroundFrequency[,34])
 numberofY<-numberofY[!is.na(numberofY)]
 
-numberofPY<-as.numeric(SubstrateBackgroundFrequency$Number.of.pY)
+numberofPY<-as.numeric(SubstrateBackgroundFrequency[,35])
 numberofPY<-numberofPY[!is.na(numberofPY)]
 
 NormalizationScore<-sum(numberofPY)/sum(numberofY)