| Previous changeset 0:9aafb378478e (2016-04-21) Next changeset 2:45d1fe01e29d (2016-04-21) |
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Commit message:
Uploaded |
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added:
kurator-wrapper.xml |
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| diff -r 9aafb378478e -r b04af3140b73 kurator-wrapper.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/kurator-wrapper.xml Thu Apr 21 17:14:11 2016 -0400 |
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| @@ -0,0 +1,23 @@ +<tool id="kurator_1" name="Kurator-wrapper" version="0.1.0"> + <description>The wrapper to run Kurator in Galaxy</description> + <command>java -jar \$JAR_PATH/kurator-akka.jar -f $kuratorWorkflow -p input=$inputDataFile -p output=$outputDataFile</command> + <inputs> + <param name="kuratorWorkflow" type="data" label="Kurator workflow"/> + <param name="inputDataFile" type="data" label="Input file to be curated"/> + </inputs> + <outputs> + <data name="outputDataFile"/> + </outputs> + + <tests> + <test> + <param name="inputDataFile" value="five_records.csv"/> + <param name="kuratorWorkflow" value="example.yaml"/> + <output name="outputDataFile" file="five_records_output.txt"/> + </test> + </tests> + + <requirements> + <requirement type="package" version="0.0.1">Kurator_Package</requirement> + </requirements> +</tool> |