| Previous changeset 2:ca82f52681af (2017-11-09) Next changeset 4:019864881779 (2021-02-01) |
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Commit message:
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann2 commit 18fea370966f4b87c8180df4afa0f3b138b75908" |
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modified:
humann2.xml repository_dependencies.xml |
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| diff -r ca82f52681af -r b168c0ef3c14 humann2.xml --- a/humann2.xml Thu Nov 09 13:44:40 2017 -0500 +++ b/humann2.xml Sat Jan 25 18:25:32 2020 -0500 |
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| @@ -236,8 +236,8 @@ <param name="nucleotide_db_selector" value="history"/> <param name="nucleotide_database"> <collection type="list"> - <element name="g__Bacteroides.s__Bacteroides_stercoris.centroids.v0.1.1" ftype="fasta" value="g__Bacteroides.s__Bacteroides_stercoris.centroids.v0.1.1.ffn.gz" /> - <element name="g__Bacteroides.s__Bacteroides_thetaiotaomicron.centroids.v0.1.1" ftype="fasta" value="g__Bacteroides.s__Bacteroides_thetaiotaomicron.centroids.v0.1.1.ffn.gz" /> + <element name="g__Bacteroides.s__Bacteroides_stercoris.centroids.v0.1.1" ftype="fasta.gz" value="g__Bacteroides.s__Bacteroides_stercoris.centroids.v0.1.1.ffn.gz" /> + <element name="g__Bacteroides.s__Bacteroides_thetaiotaomicron.centroids.v0.1.1" ftype="fasta.gz" value="g__Bacteroides.s__Bacteroides_thetaiotaomicron.centroids.v0.1.1.ffn.gz" /> </collection> </param> <param name="annotation_gene_index" value="8" /> @@ -290,8 +290,8 @@ <param name="nucleotide_db_selector" value="history"/> <param name="nucleotide_database"> <collection type="list"> - <element name="g__Bacteroides.s__Bacteroides_stercoris.centroids.v0.1.1" ftype="fasta" value="g__Bacteroides.s__Bacteroides_stercoris.centroids.v0.1.1.ffn.gz" /> - <element name="g__Bacteroides.s__Bacteroides_thetaiotaomicron.centroids.v0.1.1" ftype="fasta" value="g__Bacteroides.s__Bacteroides_thetaiotaomicron.centroids.v0.1.1.ffn.gz" /> + <element name="g__Bacteroides.s__Bacteroides_stercoris.centroids.v0.1.1" ftype="fasta.gz" value="g__Bacteroides.s__Bacteroides_stercoris.centroids.v0.1.1.ffn.gz" /> + <element name="g__Bacteroides.s__Bacteroides_thetaiotaomicron.centroids.v0.1.1" ftype="fasta.gz" value="g__Bacteroides.s__Bacteroides_thetaiotaomicron.centroids.v0.1.1.ffn.gz" /> </collection> </param> <param name="annotation_gene_index" value="8" /> |
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| diff -r ca82f52681af -r b168c0ef3c14 repository_dependencies.xml --- a/repository_dependencies.xml Thu Nov 09 13:44:40 2017 -0500 +++ b/repository_dependencies.xml Sat Jan 25 18:25:32 2020 -0500 |
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| @@ -1,5 +1,5 @@ -<?xml version="1.0"?> +<?xml version="1.0" ?> <repositories description="This requires the HUMAnN2 data manager definition to install all required databases."> - <repository changeset_revision="9c4ad82be5bd" name="data_manager_metaphlan2_database_downloader" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> - <repository changeset_revision="9244804f69a7" name="data_manager_humann2_database_downloader" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> -</repositories> + <repository changeset_revision="9c4ad82be5bd" name="data_manager_metaphlan2_database_downloader" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/> + <repository changeset_revision="9244804f69a7" name="data_manager_humann2_database_downloader" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/> +</repositories> \ No newline at end of file |