| Previous changeset 2:58124285e462 (2019-07-05) Next changeset 4:94fe43e75ddc (2021-01-19) |
|
Commit message:
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bandage commit ef940ee99e8bf07cfe86b273a3eda72f09003fb3" |
|
modified:
bandage_image.xml bandage_info.xml macros.xml |
| b |
| diff -r 58124285e462 -r b2860df42e16 bandage_image.xml --- a/bandage_image.xml Fri Jul 05 11:36:09 2019 -0400 +++ b/bandage_image.xml Thu Dec 05 17:17:29 2019 -0500 |
| [ |
| @@ -1,4 +1,4 @@ -<tool id="bandage_image" name="Bandage Image" version="@TOOL_VERSION@+galaxy1"> +<tool id="bandage_image" name="Bandage Image" version="@TOOL_VERSION@+galaxy2" profile="18.01"> <description>visualize de novo assembly graphs</description> <macros> <import>macros.xml</import> @@ -6,9 +6,7 @@ <expand macro="requirements"/> <expand macro="version_command"/> <command detect_errors="exit_code"> <![CDATA[ -## set headless mode -export QT_QPA_PLATFORM='offscreen' && - +@HEADLESS@ Bandage image '$input_file' |
| b |
| diff -r 58124285e462 -r b2860df42e16 bandage_info.xml --- a/bandage_info.xml Fri Jul 05 11:36:09 2019 -0400 +++ b/bandage_info.xml Thu Dec 05 17:17:29 2019 -0500 |
| [ |
| @@ -1,4 +1,4 @@ -<tool id="bandage_info" name="Bandage Info" version="@TOOL_VERSION@+galaxy0"> +<tool id="bandage_info" name="Bandage Info" version="@TOOL_VERSION@+galaxy1" profile="18.01"> <description>determine statistics of de novo assembly graphs</description> <macros> <import>macros.xml</import> @@ -7,6 +7,7 @@ <expand macro="version_command"/> <command detect_errors="exit_code"> <![CDATA[ +@HEADLESS@ Bandage info '$input_file' |
| b |
| diff -r 58124285e462 -r b2860df42e16 macros.xml --- a/macros.xml Fri Jul 05 11:36:09 2019 -0400 +++ b/macros.xml Thu Dec 05 17:17:29 2019 -0500 |
| [ |
| @@ -6,8 +6,10 @@ </requirements> </xml> <xml name="version_command"> - <version_command>Bandage --version</version_command> + <version_command>@HEADLESS@ Bandage --version</version_command> </xml> + <token name="@HEADLESS@"><![CDATA[export QT_QPA_PLATFORM='offscreen' &&]]> +</token> <token name="@BANDAGE_OVERVIEW@"> **Bandage Overview** |