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fimo.xml |
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diff -r cdcc4bb60bc3 -r b3f7ff168b9a fimo.xml --- a/fimo.xml Wed Jun 29 08:35:04 2016 -0400 +++ b/fimo.xml Thu Jul 07 09:55:00 2016 -0400 |
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@@ -1,4 +1,4 @@ -<tool id="meme_fimo" name="FIMO" version="4.11.0.3"> +<tool id="meme_fimo" name="FIMO" version="4.11.0.4"> <description>- Scan a set of sequences for motifs.</description> <requirements> <requirement type="package" version="6.9.3">imagemagick</requirement> @@ -181,7 +181,7 @@ </actions> </data> <data format="tabular" name="gff_outfile" label="${tool.name} on ${on_string} (almost-gff)"> - <filter>options_type['output_separate_motifs'] == 'no'</filter> + <filter>options_type['options_type_selector'] == 'basic' or (options_type['options_type_selector'] == 'advanced' and options_type['output_separate_motifs'] == 'no')</filter> <actions> <conditional name="fasta_type.fasta_type_selector"> <when value="cached"> @@ -196,7 +196,7 @@ </data> <collection name="motifs" type="list" label="Motifs: ${tool.name} on ${on_string}"> <discover_datasets pattern="(?P<designation>.*)" directory="output" ext="gff" visible="false" /> - <filter>options_type['output_separate_motifs'] == 'yes'</filter> + <filter>options_type['options_type_selector'] == 'advanced' and options_type['output_separate_motifs'] == 'yes'</filter> </collection> <data format="cisml" name="xml_outfile" label="${tool.name} on ${on_string} (xml)"> <actions> |