| Previous changeset 2:79f9e32b380b (2017-10-20) Next changeset 4:1e24dd91db95 (2018-05-24) |
|
Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit 39a5f30a013c6d71ea84807b72511e3aa4bab147 |
|
modified:
crossmap_bed.xml macros.xml test-data/cached_locally/liftOver.loc |
| b |
| diff -r 79f9e32b380b -r b49e453e6f97 crossmap_bed.xml --- a/crossmap_bed.xml Fri Oct 20 02:48:24 2017 -0400 +++ b/crossmap_bed.xml Fri Oct 20 11:33:15 2017 -0400 |
| b |
| @@ -91,7 +91,7 @@ </test> <test><!-- clone of first test: tests cached reference chain file --> - <param name="input" value="test_bed_01_input_a.bed" ftype="bed"/> + <param name="input" value="test_bed_01_input_a.bed" ftype="bed" dbkey="hg18"/> <param name="index_source" value="cached"/> <param name="merge_unmapped_entries" value="false" /> |
| b |
| diff -r 79f9e32b380b -r b49e453e6f97 macros.xml --- a/macros.xml Fri Oct 20 02:48:24 2017 -0400 +++ b/macros.xml Fri Oct 20 11:33:15 2017 -0400 |
| b |
| @@ -28,9 +28,7 @@ <when value="cached"> <param name="input_chain" type="select" label="Lift Over To"> <options from_data_table="liftOver"> - <!-- <filter type="data_meta" ref="input" key="dbkey" column="0"/> - --> </options> </param> </when> |
| b |
| diff -r 79f9e32b380b -r b49e453e6f97 test-data/cached_locally/liftOver.loc --- a/test-data/cached_locally/liftOver.loc Fri Oct 20 02:48:24 2017 -0400 +++ b/test-data/cached_locally/liftOver.loc Fri Oct 20 11:33:15 2017 -0400 |
| b |
| @@ -29,4 +29,4 @@ #anoCar1 hg18 /depot/data2/galaxy/anoCar1/liftOver/anoCar1ToHg18.over.chain #...etc... -A B ${__HERE__}/aToB.over.chain +hg18 hg19 ${__HERE__}/aToB.over.chain |