| Previous changeset 2:937ea677d437 (2021-10-04) Next changeset 4:59bd28f6265d (2021-12-13) |
|
Commit message:
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/trycycler commit ab252d84772e94d522b4d436a11dc31b3a4d6712" |
|
modified:
macros.xml trycycler_reconcile_msa.xml |
| b |
| diff -r 937ea677d437 -r b5e35a2ca4f3 macros.xml --- a/macros.xml Mon Oct 04 16:20:58 2021 +0000 +++ b/macros.xml Tue Oct 19 08:31:08 2021 +0000 |
| b |
| @@ -1,5 +1,5 @@ <macros> - <token name="@TOOL_VERSION@">0.5.0</token> + <token name="@TOOL_VERSION@">0.5.1</token> <token name="@PIPELINE@"> **Trycycler pipeline** |
| b |
| diff -r 937ea677d437 -r b5e35a2ca4f3 trycycler_reconcile_msa.xml --- a/trycycler_reconcile_msa.xml Mon Oct 04 16:20:58 2021 +0000 +++ b/trycycler_reconcile_msa.xml Tue Oct 19 08:31:08 2021 +0000 |
| b |
| @@ -52,7 +52,7 @@ </section> <section name="final_check" title="Reconcile final check" expanded="true"> <param argument="--min_identity" type="integer" min="70" max="100" value="98" label="Min global alignment percentage identity" help="If any of the sequences have a pairwise global alignment percent identity of less than this (default = 98), then the contigs will fail the final check." /> - <param argument="--max_indel_size" type="integer" min="100" max="400" value="250" label="Max alignment indel size" help="If any of the sequences have a pairwise alignment indel size of more than this (default = 250), then the contigs will fail the final check." /> + <param argument="--max_indel_size" type="integer" min="0" max="10000" value="1000" label="Max alignment indel size" help="If any of the sequences have a pairwise alignment indel size of more than this (default = 1000), then the contigs will fail the final check." /> </section> <section name="msa" title="Multiple sequence alignment (MSA) options" expanded="true"> <param argument="--kmer" type="integer" min="20" max="45" value="32" label="k-mer size" help="The k-mer size used for sequence partitioning (default = 32)" /> |