| Previous changeset 6:582fd74dc2a1 (2023-04-25) Next changeset 8:756376aeb1ae (2023-11-01) |
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Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/funannotate commit 90acc0e23230b2e29e1d38a90bca4009c84c7e67 |
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modified:
funannotate_annotate.xml macros.xml |
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| diff -r 582fd74dc2a1 -r b6b5cd37f2a2 funannotate_annotate.xml --- a/funannotate_annotate.xml Tue Apr 25 18:29:19 2023 +0000 +++ b/funannotate_annotate.xml Fri Oct 20 10:07:28 2023 +0000 |
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| @@ -71,6 +71,14 @@ && +## funannotate sometimes leaves multiple *part.tbl and *part.sqn files +## https://github.com/nextgenusfs/funannotate/issues/777 +find output/annotate_results +-regex ".*part_[0-9]\+\.\(sqn\|tbl\)$" +-delete + +&& + mv output/annotate_results/*.gbk out.gbk && mv output/annotate_results/*.annotations.txt out.annotations.txt && mv output/annotate_results/*.contigs.fsa out.contigs.fsa && @@ -206,7 +214,7 @@ </data> </outputs> <tests> - <test> + <test expect_num_outputs="16"> <conditional name="input"> <param name="input_type" value="gbk" /> <param name="genbank" value="predict_augustus/Genus_species.gbk" /> @@ -296,7 +304,7 @@ </assert_contents> </output> </test> - <test> + <test expect_num_outputs="16"> <conditional name="input"> <param name="input_type" value="gff" /> <param name="gff" value="predict_augustus/Genus_species.gff3" /> |
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| diff -r 582fd74dc2a1 -r b6b5cd37f2a2 macros.xml --- a/macros.xml Tue Apr 25 18:29:19 2023 +0000 +++ b/macros.xml Fri Oct 20 10:07:28 2023 +0000 |
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| @@ -1,7 +1,7 @@ <?xml version="1.0"?> <macros> <token name="@TOOL_VERSION@">1.8.15</token> - <token name="@VERSION_SUFFIX@">1</token> + <token name="@VERSION_SUFFIX@">2</token> <xml name="requirements"> <requirement type="package" version="@TOOL_VERSION@">funannotate</requirement> |