| Previous changeset 6:8fa86fa43060 (2015-05-16) |
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Commit message:
Deleted selected files |
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removed:
tool_dependencies.xml |
| b |
| diff -r 8fa86fa43060 -r b84fe658fb48 tool_dependencies.xml --- a/tool_dependencies.xml Sat May 16 05:29:17 2015 -0400 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 |
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| @@ -1,31 +0,0 @@ -<?xml version="1.0"?> -<tool_dependency> - <package name="R" version="3.0.3"> - <repository changeset_revision="6e0eee4ea4e1" name="package_r_3_1_2" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> - </package> - <package name="xcms" version="1.44.0"> - <install version="1.0"> - <actions> - <action type="setup_r_environment"> - <repository changeset_revision="6e0eee4ea4e1" name="package_r_3_1_2" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> - <package name="R" version="3.0.3" /> - </repository> - <package>http://cran.ms.unimelb.edu.au/src/contrib/Rcpp_0.11.6.tar.gz?raw=true</package> - <package>http://bioc.ism.ac.jp//packages/3.1/bioc/src/contrib/BiocGenerics_0.14.0.tar.gz?raw=true</package> - <package>http://bioc.ism.ac.jp//packages/3.1/bioc/src/contrib/Biobase_2.28.0.tar.gz?raw=true</package> - <package>http://bioc.ism.ac.jp//packages/3.1/bioc/src/contrib/ProtGenerics_1.0.0.tar.gz?raw=true</package> - <package>http://www.bioconductor.org/packages/release/bioc/src/contrib/zlibbioc_1.14.0.tar.gz?raw=true</package> - <package>http://bioc.ism.ac.jp//packages/3.1/bioc/src/contrib/mzR_2.2.1.tar.gz?raw=true</package> - <package>http://bioc.ism.ac.jp//packages/3.1/bioc/src/contrib/xcms_1.44.0.tar.gz?raw=true</package> - </action> - </actions> - </install> - <readme> - xcms is a package from Bioconductor containing all needed steps for GC-LCMS analysis begening with the preprocessing and ending with - the exploratory analysis. - integrated to the main galaxy toolshed by bensellak.taoufik@gmail.com for studies purpose and trainee ship on mass spectrometry - analysis workflows and pipelines answering for some biological questions such as biomarquers identification extraction and - slection. targeted and untargeted (label free) quantification. - </readme> - </package> -</tool_dependency> |