Repository 'anndata_manipulate'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/anndata_manipulate

Changeset 8:b85871dd69f9 (2021-01-07)
Previous changeset 7:43cb7b5a6fe7 (2020-07-22) Next changeset 9:8db95f488f0f (2021-02-19)
Commit message:
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/anndata/ commit 6497f5415b57bedd849b876883574b3f0050741a"
modified:
macros.xml
manipulate.xml
test-data/inspect.general.txt
test-data/manipulate.concatenate.h5ad
b
diff -r 43cb7b5a6fe7 -r b85871dd69f9 macros.xml
--- a/macros.xml Wed Jul 22 12:21:13 2020 -0400
+++ b/macros.xml Thu Jan 07 23:26:02 2021 +0000
b
@@ -1,6 +1,6 @@
 <macros>
-    <token name="@VERSION@">0.6.22.post1</token>
-    <token name="@GALAXY_VERSION@">galaxy4</token>
+    <token name="@VERSION@">0.7.4</token>
+    <token name="@GALAXY_VERSION@">galaxy1</token>
     <xml name="requirements">
         <requirements>
             <requirement type="package" version="@VERSION@">anndata</requirement>
b
diff -r 43cb7b5a6fe7 -r b85871dd69f9 manipulate.xml
--- a/manipulate.xml Wed Jul 22 12:21:13 2020 -0400
+++ b/manipulate.xml Thu Jan 07 23:26:02 2021 +0000
[
@@ -242,7 +242,7 @@
     <tests>
         <test>
             <!-- test 1 -->
-            <param name="input" value="krumsiek11.h5ad"/>
+            <param name="input" value="import.csv.h5ad"/>
             <conditional name="manipulate">
                 <param name="function" value="concatenate"/>
                 <param name="other_adatas" value="import.csv.h5ad"/>
@@ -380,7 +380,7 @@
             <conditional name="manipulate">
                 <param name="function" value="save_raw"/>
             </conditional>
-            <output name="anndata" value="manipulate.save_raw.h5ad" ftype="h5ad" compare="sim_size"/>
+            <output name="anndata" value="manipulate.save_raw.h5ad" ftype="h5ad" compare="sim_size" delta="20000" />
         </test>
     </tests>
     <help><![CDATA[
b
diff -r 43cb7b5a6fe7 -r b85871dd69f9 test-data/inspect.general.txt
--- a/test-data/inspect.general.txt Wed Jul 22 12:21:13 2020 -0400
+++ b/test-data/inspect.general.txt Thu Jan 07 23:26:02 2021 +0000
b
@@ -1,3 +1,3 @@
-AnnData object with n_obs × n_vars = 640 × 11 
+AnnData object with n_obs × n_vars = 640 × 11
     obs: 'cell_type'
     uns: 'cell_type_colors', 'highlights', 'iroot'
b
diff -r 43cb7b5a6fe7 -r b85871dd69f9 test-data/manipulate.concatenate.h5ad
b
Binary file test-data/manipulate.concatenate.h5ad has changed