Repository 'cluster'
hg clone https://toolshed.g2.bx.psu.edu/repos/sandeep/cluster

Changeset 2:b94770299f28 (2017-11-28)
Previous changeset 1:2d4ebd96cc21 (2017-11-28)
Commit message:
Uploaded
added:
peptide_pool1.fasta
b
diff -r 2d4ebd96cc21 -r b94770299f28 peptide_pool1.fasta
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/peptide_pool1.fasta Tue Nov 28 18:01:04 2017 -0500
b
b'@@ -0,0 +1,600 @@\n+>peptide1\n+AQIYQAVSAQAAAIH\n+>peptide2\n+PQVVNINTKLGYNNA\n+>peptide3\n+SVLAAVGLGLATAPA\n+>peptide4\n+VAQVGPQVVNINTKL\n+>peptide5\n+GQNYTYKWETFLTRE\n+>peptide6\n+DPMVQIPRLVANNTR\n+>peptide7\n+PSPSMGRDIKVQFQS\n+>peptide8\n+QVPSASMGRDIKVQF\n+>peptide9\n+AEAPAAAAAPEEQVQ\n+>peptide10\n+GAMVATNFFGINTIP\n+>peptide11\n+GVLVATNFFGINTIP\n+>peptide12\n+AVLVATNFFGINTIP\n+>peptide13\n+ARMWIQAATTMASYQ\n+>peptide14\n+LAWLVQASANSAAMA\n+>peptide15\n+GINTIPIAINEAEYV\n+>peptide16\n+YAAALVAMPTLAELA\n+>peptide17\n+AAFQAAHARFVAAAA\n+>peptide18\n+AAFQGAHARFVAAAA\n+>peptide19\n+AAGTYVAADAAAASS\n+>peptide20\n+AAGTYVAADAAAAST\n+>peptide21\n+AMEDLVRAYHAMSST\n+>peptide22\n+AMMARDTAEAAKWGG\n+>peptide23\n+AQWNQAMEDLVRAYH\n+>peptide24\n+DTGITYQAWQAQWNQ\n+>peptide25\n+GDMAGYAGTLQSLGA\n+>peptide26\n+HEANTMAMMARDTAE\n+>peptide27\n+MAMMARDTAEAAKWG\n+>peptide28\n+MLGHAGDMAGYAGTL\n+>peptide29\n+MSQIMYNYPAMLGHA\n+>peptide30\n+QAALQSAWQGDTGIT\n+>peptide31\n+SAWQGDTGITYQAWQ\n+>peptide32\n+VRAYHAMSSTHEANT\n+>peptide33\n+YAGTLQSLGAEIAVE\n+>peptide34\n+YNYPAMLGHAGDMAG\n+>peptide35\n+YQAWQAQWNQAMEDL\n+>peptide36\n+EDLVRAYHAMSSTHE\n+>peptide37\n+EDLVRAYHSMSSTHE\n+>peptide38\n+LQSLGADIASEQAVL\n+>peptide39\n+LQSLGAEIAVEQAAL\n+>peptide40\n+MSQIMYNYPAMMAHA\n+>peptide41\n+MSQIMYNYPAMRAHA\n+>peptide42\n+DRWLDLRYVGPASAD\n+>peptide43\n+EVVDYLGIPASARPV\n+>peptide44\n+GNGVVALRNAQLVTF\n+>peptide45\n+AAGAQLLWQLPLLSI\n+>peptide46\n+AAGVAAWSLIALMIP\n+>peptide47\n+GWYLVAATAAAATLR\n+>peptide48\n+IPVMAYLVGLFAWVL\n+>peptide49\n+QLSALWARFPLPVIP\n+>peptide50\n+AARLLSIRAMSTKFS\n+>peptide51\n+AAVDKDAVIVAAAGN\n+>peptide52\n+ALSVLVGLTAATVAI\n+>peptide53\n+ATEVVRRLTATAHRG\n+>peptide54\n+AILRRRRRIAEPATC\n+>peptide55\n+ALTALIRDPPADSTG\n+>peptide56\n+EIGWEAGTAAPDEIP\n+>peptide57\n+AQAVYDFRSIVDYLR\n+>peptide58\n+LDYLRRMTVFLQGLM\n+>peptide59\n+LNYRPLLPKDRRMII\n+>peptide60\n+RCALHWFPGSHLLAC\n+>peptide61\n+RCALHWFPGSHLLHV\n+>peptide62\n+AKLMRDIPFRVGAVV\n+>peptide63\n+DESWQQFRQELIPLL\n+>peptide64\n+MWDPDVYLAFSGHRN\n+>peptide65\n+STIFPFRRLFMVADV\n+>peptide66\n+STIFPFRRLFMVAEV\n+>peptide67\n+AYAQRVYQANRAAGS\n+>peptide68\n+VTVDAAVLAAIDADA\n+>peptide69\n+EHELYVAVLSNALHR\n+>peptide70\n+RVPEDLLAMVVAVEQ\n+>peptide71\n+AWMSAAAAQAEQAAT\n+>peptide72\n+GWSSLGREYAAVAEE\n+>peptide73\n+AVPLRLLGGLHRMVL\n+>peptide74\n+MYRELLELVAADVES\n+>peptide75\n+IDLNVLLSAAINFFL\n+>peptide76\n+CILAWILVRIINVRS\n+>peptide77\n+IGLVTQTINDFYFVI\n+>peptide78\n+AEHQAIIRDVLTASD\n+>peptide79\n+AEHQAIVRDVLAASD\n+>peptide80\n+YLGLEVLTRARAALT\n+>peptide81\n+AGWLAFFRDLVARGL\n+>peptide82\n+LRGLLSTFIAALMGA\n+>peptide83\n+QASPDLLRGLLSTFI\n+>peptide84\n+ARTDLLAFTAFPKQI\n+>peptide85\n+ASIIRLVGAVLAEQH\n+>peptide86\n+FPDRASIIRLVGAVL\n+>peptide87\n+ALLPRAGAAAAAALP\n+>peptide88\n+ALSRVHSMFLGTGGS\n+>peptide89\n+ALSRVQSMFLGTGGS\n+>peptide90\n+APQINFFYYLGEPIV\n+>peptide91\n+MSFVTTQPEALAAAA\n+>peptide92\n+MHVSFVMAYPEMLAA\n+>peptide93\n+SSYAATEVANAAAGQ\n+>peptide94\n+VHVSFVMAYPEMLAA\n+>peptide95\n+LGGLWTAVSPHLSPL\n+>peptide96\n+LSPISNMVSMANNHM\n+>peptide97\n+LSPISNMVSMANNHV\n+>peptide98\n+LSPLSNMVSMANNHM\n+>peptide99\n+RSPISNMVSMANNHM\n+>peptide100\n+MVDFGALPPEINSARMYAGP\n+>peptide101\n+AAERGPGQMLGGLPV\n+>peptide102\n+AANQLMNNVPQALQQ\n+>peptide103\n+AAVEEASDTAAANQL\n+>peptide104\n+AAYETAYGLTVPPPV\n+>peptide105\n+GGLPVGQMGARAGGG\n+>peptide106\n+GSASLVAAAQMWDSV\n+>peptide107\n+IAENRAELMILIATN\n+>peptide108\n+INSARMYAGPGSASL\n+>peptide109\n+LAQPTQGTTPSSKLG\n+>peptide110\n+LIATNLLGQNTPAIA\n+>peptide111\n+LLEQAAAVEEASDTA\n+>peptide112\n+LLGQNTPAIAVNEAE\n+>peptide113\n+LLPFEEAPEMTSAGG\n+>peptide114\n+MVAAASPYVAWMSVT\n+>peptide115\n+PGQMLGGLPVGQMGA\n+>peptide116\n+SPYVAWMSVTAGQAE\n+>peptide117\n+TPAIAVNEAEYGEMW\n+>peptide118\n+VAAAQMWDSVASDLF\n+>peptide119\n+VPPPVIAENRAELMI\n+>peptide120\n+WMSVTAGQAELTAAQ\n+>peptide121\n+YGEMWAQDAAAMFGY\n+>peptide122\n+AELMILIATNLLGQN\n+>peptide123\n+AQNGVQAMSSLGSSL\n+>peptide124\n+AEHQAIVRDVLAAGD\n+>peptide125\n+RSRPRRTTRRMDRRT\n+>peptide126\n+AQLGYTIRQLERLLQ\n+>peptide127\n+IRQLERLLQAVVGAG\n+>peptide128\n+AVHVWLRLPAGRVEI\n+>peptide129\n+LQSLWANFYELLADA\n+>peptide130\n+WFINWYLPISQLFYN\n+>peptide131\n+AAAQASAAAAAYEAA\n+>peptide132\n+AATQARAAAAAFEAA\n+>peptide133\n+APYVAWMRATAIQAE\n+>peptide134\n+FGQNTSAIAAAEAQY\n+>peptide135\n+FGQNTGAIAAAEARY\n+>peptide136\n+FFGQNTAAIAATEAQ\n+>pe'..b'QAATVMSA\n+>peptide169\n+AWHGPASLAMTRAAS\n+>peptide170\n+DALSGLGLPPPWQPA\n+>peptide171\n+DVDWAEVAADLQQGA\n+>peptide172\n+FGFSIPQLGFTLSGA\n+>peptide173\n+FGLFPDVDWAEVAAD\n+>peptide174\n+GILTRFGFSIPQLGF\n+>peptide175\n+GLAGDAWHGPASLAM\n+>peptide176\n+LGLPPPWQPALPRLF\n+>peptide177\n+LPPEVNSARIFAGAG\n+>peptide178\n+LTTYILLPSQDLPLL\n+>peptide179\n+MNFAVLPPEVNSARI\n+>peptide180\n+PQLGFTLSGATPADA\n+>peptide181\n+SPAMVAANRTRLASL\n+>peptide182\n+TRAASPYVGWLNTAA\n+>peptide183\n+VQGVNDALSGLGLPP\n+>peptide184\n+YPTVDYAFQYDGVND\n+>peptide185\n+QRNLSVVAPSQFTFS\n+>peptide186\n+VVAPSQFTFSSRSPD\n+>peptide187\n+LPPEVNSARMYGGAG\n+>peptide188\n+VDFGALPPEVNSARM\n+>peptide189\n+AAFSRMLSLFFRQHI\n+>peptide190\n+FDHEFTFGWDELLSK\n+>peptide191\n+FDREFTFGWDELLSK\n+>peptide192\n+FYNEKAFLLTTFDVS\n+>peptide193\n+FVQALTTAAASYASV\n+>peptide194\n+YASVEAANASPLQVA\n+>peptide195\n+SRIDGTHQTLQGADL\n+>peptide196\n+AAFSKLPASTIDELK\n+>peptide197\n+ANATVYMIDSVLMPP\n+>peptide198\n+AALPLLFFALAGQRI\n+>peptide199\n+GTVVLTATFALGAAL\n+>peptide200\n+LALVGFLGGLITGIS\n+>peptide201\n+LALVGFLGGLITGTS\n+>peptide202\n+RGKVVLIDFWAYPCI\n+>peptide203\n+INLIIHYVDRPGALG\n+>peptide204\n+INLIIHYVHRAGALG\n+>peptide205\n+IVQINGRHFDLRAQG\n+>peptide206\n+AVDGRFAVPQILGDE\n+>peptide207\n+AASLLDEDMDALEEA\n+>peptide208\n+YRIAARPGAVTRRAA\n+>peptide209\n+EIVQFLEETFAAYDQ\n+>peptide210\n+AALPAVGAAAGAPAA\n+>peptide211\n+AAVPAVGAAAGAPAA\n+>peptide212\n+ALSAEYAAVAQELSV\n+>peptide213\n+DYVRMWVQAATAMSA\n+>peptide214\n+ELFVAAYVPYVAWLV\n+>peptide215\n+GWIISNIFGAIPVLA\n+>peptide216\n+GWIISNIFGAIPVLG\n+>peptide217\n+LLEFAVVLELAILSI\n+>peptide218\n+AEKFKEDVINDFVSS\n+>peptide219\n+AHGETVSAVAELIGD\n+>peptide220\n+QQIKFAALSARAVAL\n+>peptide221\n+ALQSHDDVALVSVMW\n+>peptide222\n+ILPIAEMSVVAMEFG\n+>peptide223\n+SARLRLLRDRLVEGV\n+>peptide224\n+IQARAAALAFEQAYA\n+>peptide225\n+AAGGWDSLAAELATT\n+>peptide226\n+LLGQNTAAIAAIEAQ\n+>peptide227\n+VTANRAELKALIASN\n+>peptide228\n+LENDNQLLYNYPGAL\n+>peptide229\n+MAFLRSVSCLAAAVF\n+>peptide230\n+MAFLRSVSRLAAAVF\n+>peptide231\n+GEEYLILSARDVLAV\n+>peptide232\n+LRIAAKIYSEADEAW\n+>peptide233\n+VDLAKSLRIAAKIYS\n+>peptide234\n+AEHQAIISDVLTASD\n+>peptide235\n+AGSLEAEHQAIISDV\n+>peptide236\n+DAHGAMIRAQAGSLE\n+>peptide237\n+EQANAHGQKVQAAGN\n+>peptide238\n+FQVIYEQANAHGQKV\n+>peptide239\n+HGQKVQAAGNNMAQT\n+>peptide240\n+MTINYQFGDVDAHGA\n+>peptide241\n+QAAGNNMAQTDSAVG\n+>peptide242\n+QFGDVDAHGAMIRAQ\n+>peptide243\n+QLGRNFQVIYEQANA\n+>peptide244\n+AGRFEVHAQTVEDEA\n+>peptide245\n+AMRDMAGRFEVHAQT\n+>peptide246\n+ATSLDTMTQMNQAFR\n+>peptide247\n+LHGVRDGLVRDANNY\n+>peptide248\n+MTDPHAMRDMAGRFE\n+>peptide249\n+MTSRFMTDPHAMRDM\n+>peptide250\n+NIVNMLHGVRDGLVR\n+>peptide251\n+RRMWASAQNISGAGW\n+>peptide252\n+SAQNISGAGWSGMAE\n+>peptide253\n+VEDEARRMWASAQNI\n+>peptide254\n+VHAQTVEDEARRMWA\n+>peptide255\n+ALGATPNTGPAPQGA\n+>peptide256\n+GGHNGVFDFPDSGTH\n+>peptide257\n+GGQSSFYSDWYQPAC\n+>peptide258\n+GKAGCQTYKWETFLT\n+>peptide259\n+MGRDIKVQFQSGGAN\n+>peptide260\n+QTYKWETFLTSELPG\n+>peptide261\n+VEYLQVPSPSMGRDI\n+>peptide262\n+VPSPSMGRDIKVQFQ\n+>peptide263\n+APLAQEREEDDEDDW\n+>peptide264\n+EREEDDEDDWDEEDD\n+>peptide265\n+GAMGQGAQSGGSTRP\n+>peptide266\n+GLVAPAPLAQEREED\n+>peptide267\n+GSTRPGLVAPAPLAQ\n+>peptide268\n+AAVVRFQEAANKQKQ\n+>peptide269\n+AAGTAAQAAVVRFQEAANKQ\n+>peptide270\n+AGSLQGQWRGAAGTAAQAAV\n+>peptide271\n+EISTNIRQAGVQYSRADEEQ\n+>peptide272\n+KTQIDQVESTAGSLQGQWRG\n+>peptide273\n+ISTNIRQAGVQYSRA\n+>peptide274\n+QAAVVRFQEAANKQK\n+>peptide275\n+QGQWRGAAGTAAQAA\n+>peptide276\n+ADEEQQQALSSQMGF\n+>peptide277\n+GNFERISGDLKTQID\n+>peptide278\n+KQELDEISTNIRQAG\n+>peptide279\n+LAQEAGNFERISGDL\n+>peptide280\n+MAEMKTDAATLAQEA\n+>peptide281\n+TDAATLAQEAGNFER\n+>peptide282\n+VQYSRADEEQQQALS\n+>peptide283\n+VRFQEAANKQKQELD\n+>peptide284\n+MTEQQWNFAGIEAAASAIQG\n+>peptide285\n+NNALQNLARTISEAGQAMAS\n+>peptide286\n+ARTISEAGQAMASTE\n+>peptide287\n+ELNNALQNLARTISE\n+>peptide288\n+IQGNVTSIHSLLDEG\n+>peptide289\n+QNLARTISEAGQAMA\n+>peptide290\n+EGKQSLTKLAAAWGG\n+>peptide291\n+ISEAGQAMASTEGNV\n+>peptide292\n+LTKLAAAWGGSGSEA\n+>peptide293\n+NVTSIHSLLDEGKQS\n+>peptide294\n+QAMASTEGNVTGMFA\n+>peptide295\n+QKWDATATELNNALQ\n+>peptide296\n+SAIQGNVTSIHSLLD\n+>peptide297\n+SGSEAYQGVQQKWDA\n+>peptide298\n+TATELNNALQNLART\n+>peptide299\n+YQGVQQKWDATATEL\n+>peptide300\n+RQSGATIADVLAEKE\n'