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tool_dependencies.xml |
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diff -r 000000000000 -r b956c151d986 tool_dependencies.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Wed Jun 17 11:05:48 2015 -0400 |
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@@ -0,0 +1,22 @@ +<?xml version="1.0"?> +<tool_dependency> + <package name="picard" version="1.134"> + <install version="1.0"> + <actions_group> + <actions architecture="x86_64" os="linux"> + <action type="download_by_url">https://github.com/broadinstitute/picard/releases/download/1.134/picard-tools-1.134.zip</action> + <action type="move_directory_files"> + <source_directory>.</source_directory> + <destination_directory>$INSTALL_DIR</destination_directory> + </action> + </actions> + <action type="set_environment"> + <environment_variable name="JAVA_JAR_PATH" action="set_to">$INSTALL_DIR</environment_variable> + </action> + </actions_group> + </install> + <readme> +This picard package dependency is retrieved directly from https://github.com/broadinstitute/picard/releases + </readme> + </package> +</tool_dependency> |