Repository 'package_picard_1_134'
hg clone https://toolshed.g2.bx.psu.edu/repos/avowinkel/package_picard_1_134

Changeset 0:b956c151d986 (2015-06-17)
Commit message:
Uploaded
added:
tool_dependencies.xml
b
diff -r 000000000000 -r b956c151d986 tool_dependencies.xml
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml Wed Jun 17 11:05:48 2015 -0400
b
@@ -0,0 +1,22 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="picard" version="1.134">
+        <install version="1.0">
+            <actions_group>
+                <actions architecture="x86_64" os="linux">
+                    <action type="download_by_url">https://github.com/broadinstitute/picard/releases/download/1.134/picard-tools-1.134.zip</action>
+                    <action type="move_directory_files">
+                        <source_directory>.</source_directory>
+                        <destination_directory>$INSTALL_DIR</destination_directory>
+                    </action>       
+                </actions>                
+                <action type="set_environment">
+                    <environment_variable name="JAVA_JAR_PATH" action="set_to">$INSTALL_DIR</environment_variable>
+                </action>
+            </actions_group>
+        </install>
+        <readme>
+This picard package dependency is retrieved directly from https://github.com/broadinstitute/picard/releases
+        </readme>
+    </package>
+</tool_dependency>