| Previous changeset 0:f81b8b6a97fb (2018-08-14) |
|
Commit message:
planemo upload commit 11382afe87364aaafb19973470d5066229a6e34f-dirty |
|
modified:
Galaxy-Workflow-Haplotype_analysis.ga |
| b |
| diff -r f81b8b6a97fb -r bd20187f16c5 Galaxy-Workflow-Haplotype_analysis.ga --- a/Galaxy-Workflow-Haplotype_analysis.ga Tue Aug 14 08:32:12 2018 -0400 +++ b/Galaxy-Workflow-Haplotype_analysis.ga Tue Aug 14 09:22:17 2018 -0400 |
| b |
| @@ -6,7 +6,7 @@ "steps": { "0": { "annotation": "", - "content_id": "testtoolshed.g2.bx.psu.edu/repos/vmarcon/vcftools_filter_stats_diversity/sniplay_vcftoolsfilter/2.0.0", + "content_id": "toolshed.g2.bx.psu.edu/repos/dereeper/vcftools_filter_stats_diversity/sniplay_vcftoolsfilter/2.0.0", "errors": null, "id": 0, "input_connections": {}, @@ -37,12 +37,12 @@ "top": 247 }, "post_job_actions": {}, - "tool_id": "testtoolshed.g2.bx.psu.edu/repos/vmarcon/vcftools_filter_stats_diversity/sniplay_vcftoolsfilter/2.0.0", + "tool_id": "toolshed.g2.bx.psu.edu/repos/dereeper/vcftools_filter_stats_diversity/sniplay_vcftoolsfilter/2.0.0", "tool_shed_repository": { "changeset_revision": null, "name": "vcftools_filter_stats_diversity", - "owner": "vmarcon", - "tool_shed": "testtoolshed.g2.bx.psu.edu" + "owner": "dereeper", + "tool_shed": "toolshed.g2.bx.psu.edu" }, "tool_state": "{\"nb_alleles_min\": \"\\\"2\\\"\", \"chromosomes\": \"\\\"3\\\"\", \"__page__\": null, \"nb_alleles_max\": \"\\\"4\\\"\", \"type_p\": \"\\\"ALL\\\"\", \"allow_missing\": \"\\\"1.0\\\"\", \"fileout_label\": \"\\\"filtered\\\"\", \"frequency\": \"\\\"0.001\\\"\", \"export\": \"\\\"VCF\\\"\", \"samples\": \"\\\"\\\"\", \"bound_end\": \"\\\"100000000\\\"\", \"input\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"max_freq\": \"\\\"0.5\\\"\", \"__rerun_remap_job_id__\": null, \"bound_start\": \"\\\"1\\\"\"}", "tool_version": "2.0.0", @@ -52,7 +52,7 @@ }, "1": { "annotation": "", - "content_id": "testtoolshed.g2.bx.psu.edu/repos/vmarcon/beagle/Beagle/1.0.0", + "content_id": "toolshed.g2.bx.psu.edu/repos/dereeper/beagle/Beagle/1.0.0", "errors": null, "id": 1, "input_connections": { @@ -84,12 +84,12 @@ "top": 355 }, "post_job_actions": {}, - "tool_id": "testtoolshed.g2.bx.psu.edu/repos/vmarcon/beagle/Beagle/1.0.0", + "tool_id": "toolshed.g2.bx.psu.edu/repos/dereeper/beagle/Beagle/1.0.0", "tool_shed_repository": { "changeset_revision": null, "name": "beagle", - "owner": "vmarcon", - "tool_shed": "testtoolshed.g2.bx.psu.edu" + "owner": "dereeper", + "tool_shed": "toolshed.g2.bx.psu.edu" }, "tool_state": "{\"phase\": \"\\\"5\\\"\", \"__page__\": null, \"__rerun_remap_job_id__\": null, \"impute\": \"\\\"5\\\"\", \"vcf_input\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\"}", "tool_version": "1.0.0", @@ -99,7 +99,7 @@ }, "2": { "annotation": "", - "content_id": "testtoolshed.g2.bx.psu.edu/repos/vmarcon/sniplay/getHaplotypesFromPhasedVCF/2.0.0", + "content_id": "toolshed.g2.bx.psu.edu/repos/dereeper/sniplay/getHaplotypesFromPhasedVCF/2.0.0", "errors": null, "id": 2, "input_connections": { @@ -135,12 +135,12 @@ "top": 194 }, "post_job_actions": {}, - "tool_id": "testtoolshed.g2.bx.psu.edu/repos/vmarcon/sniplay/getHaplotypesFromPhasedVCF/2.0.0", + "tool_id": "toolshed.g2.bx.psu.edu/repos/dereeper/sniplay/getHaplotypesFromPhasedVCF/2.0.0", "tool_shed_repository": { "changeset_revision": null, "name": "sniplay", - "owner": "vmarcon", - "tool_shed": "testtoolshed.g2.bx.psu.edu" + "owner": "dereeper", + "tool_shed": "toolshed.g2.bx.psu.edu" }, "tool_state": "{\"output_label\": \"\\\"Haplotypes\\\"\", \"input\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"__rerun_remap_job_id__\": null, \"__page__\": null}", "tool_version": "2.0.0", @@ -150,7 +150,7 @@ }, "3": { "annotation": "", - "content_id": "testtoolshed.g2.bx.psu.edu/repos/vmarcon/haplophyle/haplophyle/1.0.0", + "content_id": "toolshed.g2.bx.psu.edu/repos/dereeper/haplophyle/haplophyle/1.0.0", "errors": null, "id": 3, "input_connections": { @@ -186,12 +186,12 @@ "top": 377 }, "post_job_actions": {}, - "tool_id": "testtoolshed.g2.bx.psu.edu/repos/vmarcon/haplophyle/haplophyle/1.0.0", + "tool_id": "toolshed.g2.bx.psu.edu/repos/dereeper/haplophyle/haplophyle/1.0.0", "tool_shed_repository": { "changeset_revision": null, "name": "haplophyle", - "owner": "vmarcon", - "tool_shed": "testtoolshed.g2.bx.psu.edu" + "owner": "dereeper", + "tool_shed": "toolshed.g2.bx.psu.edu" }, "tool_state": "{\"color\": \"{\\\"__current_case__\\\": 0, \\\"choice\\\": \\\"false\\\"}\", \"input\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"__rerun_remap_job_id__\": null, \"__page__\": null}", "tool_version": "1.0.0", @@ -201,7 +201,7 @@ }, "4": { "annotation": "", - "content_id": "testtoolshed.g2.bx.psu.edu/repos/vmarcon/cytoscape/Cytoscape/1.0.0", + "content_id": "toolshed.g2.bx.psu.edu/repos/dereeper/cytoscape/Cytoscape/1.0.0", "errors": null, "id": 4, "input_connections": { @@ -233,12 +233,12 @@ "top": 270 }, "post_job_actions": {}, - "tool_id": "testtoolshed.g2.bx.psu.edu/repos/vmarcon/cytoscape/Cytoscape/1.0.0", + "tool_id": "toolshed.g2.bx.psu.edu/repos/dereeper/cytoscape/Cytoscape/1.0.0", "tool_shed_repository": { "changeset_revision": null, "name": "cytoscape", - "owner": "vmarcon", - "tool_shed": "testtoolshed.g2.bx.psu.edu" + "owner": "dereeper", + "tool_shed": "toolshed.g2.bx.psu.edu" }, "tool_state": "{\"input\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"__rerun_remap_job_id__\": null, \"__page__\": null}", "tool_version": "1.0.0", |