| Previous changeset 1:ebbf2a6a4c55 (2016-04-19) Next changeset 3:11fc60f0e942 (2016-06-22) |
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Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bam_to_scidx commit d12fc0b2960551d8659d7079e15a3d4e214786b3 |
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modified:
bam_to_scidx.xml |
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| diff -r ebbf2a6a4c55 -r bd79c4d39af0 bam_to_scidx.xml --- a/bam_to_scidx.xml Tue Apr 19 18:10:09 2016 -0400 +++ b/bam_to_scidx.xml Wed Jun 15 10:50:24 2016 -0400 |
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| @@ -3,6 +3,14 @@ <requirements> <requirement type="package" version="8.0.45">java-jdk</requirement> </requirements> + <stdio> + <!-- Anything other than zero is an error --> + <exit_code range=":-1" /> + <exit_code range="1:" /> + <!-- Check stderr in case the return code has not been set --> + <regex match="Error:" /> + <regex match="Exception:" /> + </stdio> <command> <![CDATA[ ln -f -s "${input_bam.metadata.bam_index}" "${input_bam}.bai" && |