| Previous changeset 69:fa794d2a5aaf (2019-02-12) Next changeset 71:71d5983dd41e (2020-02-06) |
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Commit message:
"planemo upload for repository https://github.com/GReD-Clermont/sRNAPipe/ commit 1b35c33c35e4d5e11764941c277edd2e1f97f729" |
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modified:
sRNAPipe.xml |
| b |
| diff -r fa794d2a5aaf -r be25d16676f6 sRNAPipe.xml --- a/sRNAPipe.xml Tue Feb 12 04:11:07 2019 -0500 +++ b/sRNAPipe.xml Thu Feb 06 10:32:47 2020 -0500 |
| [ |
| @@ -34,7 +34,7 @@ </xml> </macros> <requirements> - <requirement type="package" version="1.1">srnapipe</requirement> + <requirement type="package" version="1.1.1">srnapipe</requirement> </requirements> <version_command>srnapipe | grep 'version' | grep "version" | cut -d ' ' -f 3</version_command> <command detect_errors="aggressive"><![CDATA[ @@ -90,8 +90,6 @@ #else --snRNAs '$snrnas.snrnas.source.indices.fields.path' #end if - #else - --snRNAs "None" #end if #if str($rrnas.rrnas.use_ref) == 'true' @@ -101,8 +99,6 @@ #else --rRNAs '$rrnas.rrnas.source.indices.fields.path' #end if - #else - --rRNAs "None" #end if #if str($trnas.trnas.use_ref) == 'true' @@ -112,8 +108,6 @@ #else --tRNAs '$trnas.trnas.source.indices.fields.path' #end if - #else - --tRNAs "None" #end if --si_min $sirna.si_min @@ -123,6 +117,7 @@ --dir $html_out.files_path --html $html_out --PPPon $PPPon + --threads '\${GALAXY_SLOTS:-4}' ]]> </command> <inputs> |