| Previous changeset 43:7e14b3f1f8e1 (2024-03-01) Next changeset 45:0ec526d2d8c1 (2024-03-01) |
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Commit message:
planemo upload for repository https://github.com/usegalaxy-eu/temporary-tools/tree/master/jbrowse2 commit 015c77d802595a85f78739ee2316b452c519c796-dirty |
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modified:
jbrowse2.py |
| b |
| diff -r 7e14b3f1f8e1 -r bea0916e1080 jbrowse2.py --- a/jbrowse2.py Fri Mar 01 02:44:25 2024 +0000 +++ b/jbrowse2.py Fri Mar 01 04:44:52 2024 +0000 |
| b |
| @@ -477,7 +477,7 @@ def make_assembly(self, fapath, gname): faname = gname + ".fa.gz" - fadest = os.path.join(self.outdir, faname) + fadest = os.path.realpath(os.path.join(self.outdir, faname)) cmd = "bgzip -i -c %s -I %s.gzi > %s && samtools faidx %s" % ( fapath, fadest, |