Repository 'openbabel_remions'
hg clone https://toolshed.g2.bx.psu.edu/repos/bgruening/openbabel_remions

Changeset 2:bf3b0107c0f4 (2017-05-20)
Previous changeset 1:09cd63251df5 (2017-05-20) Next changeset 3:6b7affb0db3b (2017-05-20)
Commit message:
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/chemicaltoolbox/openbabel commit 78ac0521d7df684e96c1b9c1ba2a17b02e681608
modified:
__pycache__/cheminfolib.cpython-36.pyc
ob_filter.py
b
diff -r 09cd63251df5 -r bf3b0107c0f4 __pycache__/cheminfolib.cpython-36.pyc
b
Binary file __pycache__/cheminfolib.cpython-36.pyc has changed
b
diff -r 09cd63251df5 -r bf3b0107c0f4 ob_filter.py
--- a/ob_filter.py Sat May 20 09:00:28 2017 -0400
+++ b/ob_filter.py Sat May 20 20:03:56 2017 -0400
[
@@ -95,7 +95,7 @@
     filters = json.loads((args.filters).replace(' ', '').replace(',}', '}'))
     if args.iformat == 'sdf':
         # Check if the sdf file contains all of the required metadata to invoke the precalculation filtering
-        mol = pybel.readfile('sdf', args.input).next()
+        mol = next(pybel.readfile('sdf', args.input))
         for key, elem in filters.items():
             property = cheminfolib.ColumnNames[key]
             if not property in mol.data: