| Previous changeset 7:b55e1e1780d8 (2017-05-02) Next changeset 9:417b1cc9bd9d (2017-05-02) |
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Commit message:
Deleted selected files |
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removed:
examples/hard-withNAs/Controls_regions.bed examples/hard-withNAs/Elements1_regions.bed examples/hard-withNAs/Elements2_regions.bed examples/hard-withNAs/Elements3_regions.bed examples/hard-withNAs/Feature1.bed |
| b |
| diff -r b55e1e1780d8 -r c0c7b77abf70 examples/hard-withNAs/Controls_regions.bed --- a/examples/hard-withNAs/Controls_regions.bed Tue May 02 11:07:27 2017 -0400 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 |
| b |
| @@ -1,35 +0,0 @@ -chr1 91399892 91499892 -chr1 116449079 116545079 -chr2 231381109 231481109 -chr3 47386633 47486633 -chr3 99195712 99295712 -chr3 116765114 116865114 -chr3 134349017 134437017 -chr4 68064019 68164019 -chr4 137465811 137565811 -chr4 173293016 173393016 -chr5 59044110 59144110 -chr5 94592763 94692763 -chr5 108436006 108536006 -chr5 110836898 110936898 -chr5 146669073 146753073 -chr6 99727306 99827306 -chr7 88291325 88391325 -chr7 120999784 121099784 -chr8 126860366 126960366 -chr8 127636547 127736547 -chr11 41362564 41462564 -chr11 101741527 101841527 -chr12 15210277 15310277 -chr13 91106037 91206037 -chr13 91518822 91618822 -chr13 98963030 99055030 -chr15 39087176 39187176 -chr17 58542142 58642142 -chr18 12199823 12299823 -chr20 8173704 8273704 -chr21 16255112 16355112 -chr21 45089115 45189115 -chrX 23898983 23998983 -chrX 37029585 37129585 -chrX 103593349 103693349 |
| b |
| diff -r b55e1e1780d8 -r c0c7b77abf70 examples/hard-withNAs/Elements1_regions.bed --- a/examples/hard-withNAs/Elements1_regions.bed Tue May 02 11:07:27 2017 -0400 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 |
| b |
| @@ -1,25 +0,0 @@ -chr2 49960150 50060150 -chr2 55914445 56010445 -chr3 140330750 140422750 -chr4 41774201 41870201 -chr4 70633719 70725719 -chr4 109344735 109432735 -chr5 15027389 15123389 -chr5 43032888 43124888 -chr5 58233354 58329354 -chr5 91279761 91375761 -chr5 119466508 119558508 -chr6 85317170 85401170 -chr6 85764072 85860072 -chr6 134625363 134717363 -chr6 147472164 147564164 -chr7 77197798 77293798 -chr7 77884914 77976914 -chr7 114807399 114903399 -chr10 46352885 46444885 -chr10 67835078 67931078 -chr12 27724692 27820692 -chr12 95522506 95614506 -chr12 117869466 117957466 -chr14 100464166 100564166 -chrX 29266748 29362748 |
| b |
| diff -r b55e1e1780d8 -r c0c7b77abf70 examples/hard-withNAs/Elements2_regions.bed --- a/examples/hard-withNAs/Elements2_regions.bed Tue May 02 11:07:27 2017 -0400 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 |
| b |
| @@ -1,20 +0,0 @@ -chr1 65942901 66042901 -chr1 117128102 117228102 -chr1 190338169 190438169 -chr2 227365478 227465478 -chr6 50856764 50956764 -chr6 135703067 135803067 -chr7 38228726 38328726 -chr7 51115898 51215898 -chr7 150325760 150425760 -chr8 25475691 25575691 -chr9 73374609 73474609 -chr11 55092625 55192625 -chr11 86581661 86681661 -chr12 12795284 12895284 -chr12 48151882 48251882 -chr12 83109951 83209951 -chr15 31430278 31530278 -chr15 65610815 65710815 -chr17 40766223 40866223 -chr20 17245048 17345048 |
| b |
| diff -r b55e1e1780d8 -r c0c7b77abf70 examples/hard-withNAs/Elements3_regions.bed --- a/examples/hard-withNAs/Elements3_regions.bed Tue May 02 11:07:27 2017 -0400 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 |
| b |
| @@ -1,28 +0,0 @@ -chr1 49721616 49821616 -chr1 95059425 95159425 -chr1 207236313 207336313 -chr2 73790843 73890843 -chr3 134465321 134565321 -chr4 43433669 43533669 -chr4 122032777 122132777 -chr5 12701747 12801747 -chr5 58501529 58601529 -chr5 152853250 152953250 -chr6 136085023 136185023 -chr6 147019529 147119529 -chr7 14192964 14292964 -chr7 125519883 125619883 -chr8 77652872 77752872 -chr8 108375665 108475665 -chr9 2984971 3084971 -chr10 978822 1078822 -chr11 18395046 18495046 -chr12 47273592 47373592 -chr12 60095778 60195778 -chr12 84854096 84954096 -chr12 95157539 95257539 -chr14 23982000 24082000 -chr16 1875335 1975335 -chr16 66789863 66889863 -chr18 64644131 64744131 -chr21 15966609 16066609 |
| b |
| diff -r b55e1e1780d8 -r c0c7b77abf70 examples/hard-withNAs/Feature1.bed --- a/examples/hard-withNAs/Feature1.bed Tue May 02 11:07:27 2017 -0400 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 |
| b |
| b'@@ -1,2700 +0,0 @@\n-chr2\t49960150\t49964150\t0.98\r\n-chr2\t49964150\t49968150\t1.11\r\n-chr2\t49968150\t49972150\t1.03\r\n-chr2\t49972150\t49976150\t0.87\r\n-chr2\t49976150\t49980150\t0.94\r\n-chr2\t49980150\t49984150\t0.99\r\n-chr2\t49984150\t49988150\t1.08\r\n-chr2\t49988150\t49992150\tNA\r\n-chr2\t49992150\t49996150\t1.00\r\n-chr2\t49996150\t50000150\t0.87\r\n-chr2\t50000150\t50004150\t1.04\r\n-chr2\t50004150\t50008150\t1.04\r\n-chr2\t50008150\t50012150\t1.11\r\n-chr2\t50012150\t50016150\t0.91\r\n-chr2\t50016150\t50020150\t0.95\r\n-chr2\t50020150\t50024150\t0.94\r\n-chr2\t50024150\t50028150\t0.92\r\n-chr2\t50028150\t50032150\t1.02\r\n-chr2\t50032150\t50036150\t0.89\r\n-chr2\t50036150\t50040150\t0.90\r\n-chr2\t50040150\t50044150\t1.11\r\n-chr2\t50044150\t50048150\t1.07\r\n-chr2\t50048150\t50052150\t0.96\r\n-chr2\t50052150\t50056150\t1.07\r\n-chr2\t50056150\t50060150\t1.02\r\n-chr2\t55912445\t55916445\t0.98\r\n-chr2\t55916445\t55920445\t0.96\r\n-chr2\t55920445\t55924445\t0.98\r\n-chr2\t55924445\t55928445\tNA\r\n-chr2\t55928445\t55932445\t0.99\r\n-chr2\t55932445\t55936445\t0.91\r\n-chr2\t55936445\t55940445\t0.86\r\n-chr2\t55940445\t55944445\t1.10\r\n-chr2\t55944445\t55948445\t0.98\r\n-chr2\t55948445\t55952445\t0.88\r\n-chr2\t55952445\t55956445\t1.06\r\n-chr2\t55956445\t55960445\t1.17\r\n-chr2\t55960445\t55964445\t0.93\r\n-chr2\t55964445\t55968445\t0.97\r\n-chr2\t55968445\t55972445\t1.09\r\n-chr2\t55972445\t55976445\t0.92\r\n-chr2\t55976445\t55980445\t1.06\r\n-chr2\t55980445\t55984445\t1.07\r\n-chr2\t55984445\t55988445\t1.02\r\n-chr2\t55988445\t55992445\t0.95\r\n-chr2\t55992445\t55996445\t0.94\r\n-chr2\t55996445\t56000445\t0.99\r\n-chr2\t56000445\t56004445\t0.89\r\n-chr2\t56004445\t56008445\t0.83\r\n-chr2\t56008445\t56012445\t1.04\r\n-chr3\t140326750\t140330750\t1.00\r\n-chr3\t140330750\t140334750\t1.12\r\n-chr3\t140334750\t140338750\t1.09\r\n-chr3\t140338750\t140342750\t1.09\r\n-chr3\t140342750\t140346750\t1.12\r\n-chr3\t140346750\t140350750\t0.94\r\n-chr3\t140350750\t140354750\t1.00\r\n-chr3\t140354750\t140358750\t0.93\r\n-chr3\t140358750\t140362750\t0.83\r\n-chr3\t140362750\t140366750\t0.99\r\n-chr3\t140366750\t140370750\t1.09\r\n-chr3\t140370750\t140374750\t1.00\r\n-chr3\t140374750\t140378750\t1.02\r\n-chr3\t140378750\t140382750\tNA\r\n-chr3\t140382750\t140386750\t0.91\r\n-chr3\t140386750\t140390750\t0.97\r\n-chr3\t140390750\t140394750\t1.02\r\n-chr3\t140394750\t140398750\t0.97\r\n-chr3\t140398750\t140402750\t1.14\r\n-chr3\t140402750\t140406750\t1.00\r\n-chr3\t140406750\t140410750\t1.01\r\n-chr3\t140410750\t140414750\t1.08\r\n-chr3\t140414750\t140418750\t1.01\r\n-chr3\t140418750\t140422750\t1.02\r\n-chr3\t140422750\t140426750\t1.04\r\n-chr4\t41772201\t41776201\t1.02\r\n-chr4\t41776201\t41780201\t0.91\r\n-chr4\t41780201\t41784201\t0.96\r\n-chr4\t41784201\t41788201\t0.97\r\n-chr4\t41788201\t41792201\tNA\r\n-chr4\t41792201\t41796201\t0.92\r\n-chr4\t41796201\t41800201\t1.06\r\n-chr4\t41800201\t41804201\t1.00\r\n-chr4\t41804201\t41808201\tNA\r\n-chr4\t41808201\t41812201\t0.90\r\n-chr4\t41812201\t41816201\t0.86\r\n-chr4\t41816201\t41820201\t1.01\r\n-chr4\t41820201\t41824201\t1.02\r\n-chr4\t41824201\t41828201\t1.03\r\n-chr4\t41828201\t41832201\tNA\r\n-chr4\t41832201\t41836201\t0.90\r\n-chr4\t41836201\t41840201\t0.94\r\n-chr4\t41840201\t41844201\t1.06\r\n-chr4\t41844201\t41848201\t1.02\r\n-chr4\t41848201\t41852201\t1.05\r\n-chr4\t41852201\t41856201\t1.04\r\n-chr4\t41856201\t41860201\t1.09\r\n-chr4\t41860201\t41864201\t1.01\r\n-chr4\t41864201\t41868201\t1.02\r\n-chr4\t41868201\t41872201\t1.01\r\n-chr4\t70629719\t70633719\t1.13\r\n-chr4\t70633719\t70637719\t1.04\r\n-chr4\t70637719\t70641719\t1.05\r\n-chr4\t70641719\t70645719\t0.87\r\n-chr4\t70645719\t70649719\t0.97\r\n-chr4\t70649719\t70653719\t1.17\r\n-chr4\t70653719\t70657719\t0.96\r\n-chr4\t70657719\t70661719\t0.96\r\n-chr4\t70661719\t70665719\t0.99\r\n-chr4\t70665719\t70669719\t1.06\r\n-chr4\t70669719\t70673719\t0.94\r\n-chr4\t70673719\t70677719\t1.02\r\n-chr4\t70677719\t70681719\t1.07\r\n-chr4\t70681719\t70685719\t1.08\r\n-chr4\t70685719\t70689719\t0.99\r\n-chr4\t70689719\t70693719\t0.89\r\n-chr4\t70693719\t70697719\t1.12\r\n-chr4\t70697719\t70701719\t1.07\r\n-chr4\t70701719\t70705719\t0.99\r\n-chr4\t70705719\t70709719\t1.06\r\n-chr4\t70709719\t70713719\t1.10\r\n-chr4\t70713719\t70717719\t1.10\r\n-chr4\t70717719\t70721719\t0.88\r\n-chr4\t70721719\t70725719\t0.94\r\n-chr4\t70725719\t70729719\t1.04\r\n-chr4\t109340735\t109344735\t1.00\r\n-chr4\t109344735\t109348735\t1.00\r\n-chr4\t109348735\t109352735\t0.89\r\n-chr4\t109352735\t109356735\t1.08\r\n-chr4\t109356735\t109360735\t0.88\r\n-chr4\t109360735\t109364735\t1.09\r\n'..b'1\r\n-chr7\t121087784\t121091784\t0.89\r\n-chr7\t121091784\t121095784\t0.90\r\n-chr7\t121095784\t121099784\t1.16\r\n-chr8\t126860366\t126864366\t0.88\r\n-chr8\t126864366\t126868366\t0.83\r\n-chr8\t126868366\t126872366\t1.10\r\n-chr8\t126872366\t126876366\t0.84\r\n-chr8\t126876366\t126880366\t1.01\r\n-chr8\t126880366\t126884366\t0.93\r\n-chr8\t126884366\t126888366\t0.91\r\n-chr8\t126888366\t126892366\t1.03\r\n-chr8\t126892366\t126896366\t1.07\r\n-chr8\t126896366\t126900366\t1.06\r\n-chr8\t126900366\t126904366\t1.02\r\n-chr8\t126904366\t126908366\t1.08\r\n-chr8\t126908366\t126912366\t1.15\r\n-chr8\t126912366\t126916366\t0.79\r\n-chr8\t126916366\t126920366\t0.87\r\n-chr8\t126920366\t126924366\t0.98\r\n-chr8\t126924366\t126928366\t1.10\r\n-chr8\t126928366\t126932366\t1.02\r\n-chr8\t126932366\t126936366\t0.95\r\n-chr8\t126936366\t126940366\t1.22\r\n-chr8\t126940366\t126944366\t1.08\r\n-chr8\t126944366\t126948366\t0.91\r\n-chr8\t126948366\t126952366\t0.79\r\n-chr8\t126952366\t126956366\t0.88\r\n-chr8\t126956366\t126960366\t0.94\r\n-chr8\t127636547\t127640547\t1.03\r\n-chr8\t127640547\t127644547\t1.00\r\n-chr8\t127644547\t127648547\t1.02\r\n-chr8\t127648547\t127652547\t1.04\r\n-chr8\t127652547\t127656547\t1.07\r\n-chr8\t127656547\t127660547\t0.91\r\n-chr8\t127660547\t127664547\t1.05\r\n-chr8\t127664547\t127668547\t0.99\r\n-chr8\t127668547\t127672547\t0.95\r\n-chr8\t127672547\t127676547\t1.10\r\n-chr8\t127676547\t127680547\t1.01\r\n-chr8\t127680547\t127684547\t0.95\r\n-chr8\t127684547\t127688547\t1.03\r\n-chr8\t127688547\t127692547\t0.97\r\n-chr8\t127692547\t127696547\t0.84\r\n-chr8\t127696547\t127700547\t1.04\r\n-chr8\t127700547\t127704547\t1.20\r\n-chr8\t127704547\t127708547\t0.87\r\n-chr8\t127708547\t127712547\t1.08\r\n-chr8\t127712547\t127716547\t1.20\r\n-chr8\t127716547\t127720547\t0.83\r\n-chr8\t127720547\t127724547\t0.94\r\n-chr8\t127724547\t127728547\t0.97\r\n-chr8\t127728547\t127732547\t1.01\r\n-chr8\t127732547\t127736547\t1.07\r\n-chrX\t23898983\t23902983\t1.10\r\n-chrX\t23902983\t23906983\t0.76\r\n-chrX\t23906983\t23910983\t0.93\r\n-chrX\t23910983\t23914983\t1.09\r\n-chrX\t23914983\t23918983\t1.13\r\n-chrX\t23918983\t23922983\t0.96\r\n-chrX\t23922983\t23926983\t0.94\r\n-chrX\t23926983\t23930983\t0.94\r\n-chrX\t23930983\t23934983\t0.95\r\n-chrX\t23934983\t23938983\t1.05\r\n-chrX\t23938983\t23942983\t0.78\r\n-chrX\t23942983\t23946983\t1.24\r\n-chrX\t23946983\t23950983\t1.08\r\n-chrX\t23950983\t23954983\t0.95\r\n-chrX\t23954983\t23958983\t0.91\r\n-chrX\t23958983\t23962983\t0.98\r\n-chrX\t23962983\t23966983\t0.93\r\n-chrX\t23966983\t23970983\t1.03\r\n-chrX\t23970983\t23974983\t0.89\r\n-chrX\t23974983\t23978983\t0.95\r\n-chrX\t23978983\t23982983\t0.98\r\n-chrX\t23982983\t23986983\t1.10\r\n-chrX\t23986983\t23990983\t0.92\r\n-chrX\t23990983\t23994983\t0.88\r\n-chrX\t23994983\t23998983\t1.16\r\n-chrX\t37029585\t37033585\t0.98\r\n-chrX\t37033585\t37037585\t1.23\r\n-chrX\t37037585\t37041585\t0.78\r\n-chrX\t37041585\t37045585\t0.93\r\n-chrX\t37045585\t37049585\t0.99\r\n-chrX\t37049585\t37053585\t1.09\r\n-chrX\t37053585\t37057585\t0.98\r\n-chrX\t37057585\t37061585\t1.11\r\n-chrX\t37061585\t37065585\t1.05\r\n-chrX\t37065585\t37069585\t1.22\r\n-chrX\t37069585\t37073585\t0.91\r\n-chrX\t37073585\t37077585\t0.99\r\n-chrX\t37077585\t37081585\t0.89\r\n-chrX\t37081585\t37085585\t0.75\r\n-chrX\t37085585\t37089585\t1.10\r\n-chrX\t37089585\t37093585\t0.99\r\n-chrX\t37093585\t37097585\t0.98\r\n-chrX\t37097585\t37101585\t0.88\r\n-chrX\t37101585\t37105585\t0.94\r\n-chrX\t37105585\t37109585\t1.07\r\n-chrX\t37109585\t37113585\t0.99\r\n-chrX\t37113585\t37117585\t1.04\r\n-chrX\t37117585\t37121585\t1.13\r\n-chrX\t37121585\t37125585\t0.78\r\n-chrX\t37125585\t37129585\t1.18\r\n-chrX\t103593349\t103597349\t0.94\r\n-chrX\t103597349\t103601349\t0.98\r\n-chrX\t103601349\t103605349\t0.93\r\n-chrX\t103605349\t103609349\t0.98\r\n-chrX\t103609349\t103613349\t0.77\r\n-chrX\t103613349\t103617349\t1.04\r\n-chrX\t103617349\t103621349\t0.99\r\n-chrX\t103621349\t103625349\t0.85\r\n-chrX\t103625349\t103629349\t0.94\r\n-chrX\t103629349\t103633349\t0.93\r\n-chrX\t103633349\t103637349\t0.87\r\n-chrX\t103637349\t103641349\t1.03\r\n-chrX\t103641349\t103645349\t0.95\r\n-chrX\t103645349\t103649349\t1.03\r\n-chrX\t103649349\t103653349\t1.02\r\n-chrX\t103653349\t103657349\t1.09\r\n-chrX\t103657349\t103661349\t1.15\r\n-chrX\t103661349\t103665349\t1.08\r\n-chrX\t103665349\t103669349\t0.86\r\n-chrX\t103669349\t103673349\t1.08\r\n-chrX\t103673349\t103677349\t0.93\r\n-chrX\t103677349\t103681349\t0.89\r\n-chrX\t103681349\t103685349\t1.03\r\n-chrX\t103685349\t103689349\t1.01\r\n-chrX\t103689349\t103693349\t0.80\r\n' |