| Previous changeset 0:2e0e9c418a85 (2020-02-18) Next changeset 2:a670bdbf8869 (2021-11-27) |
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Commit message:
"planemo upload for repository https://gitlab.com/paulklemm_PHD/proteinortho commit 95f1ae4ed1cdd56114df76d215f9e1ed549aa4c5" |
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modified:
proteinortho_macros.xml proteinortho_summary.xml |
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| diff -r 2e0e9c418a85 -r c3f58c2eee1e proteinortho_macros.xml --- a/proteinortho_macros.xml Tue Feb 18 17:56:58 2020 -0500 +++ b/proteinortho_macros.xml Tue Sep 14 11:39:29 2021 +0000 |
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| @@ -1,7 +1,8 @@ <?xml version="1.0"?> <macros> - <token name="@TOOL_VERSION@">6.0.14</token> - <token name="@WRAPPER_VERSION@">2.9.1</token> + <token name="@TOOL_VERSION@">6.0.31</token> + <token name="@WRAPPER_VERSION@">0</token> + <token name="@PROFILE@">20.09</token> <xml name="citations"> <citations> <citation type="doi">10.1186/1471-2105-12-124</citation> @@ -11,10 +12,12 @@ <xml name="requirements"> <requirements> <requirement type="package" version="@TOOL_VERSION@">proteinortho</requirement> - <requirement type="package">diamond</requirement> - <requirement type="package">blast</requirement> - <requirement type="package">blat</requirement> - <requirement type="package">last</requirement> + <!-- blast, blat, and last are not in the biopython requirements + diamond is, but latest version does not work: https://gitlab.com/paulklemm_PHD/proteinortho/-/issues/55 --> + <requirement type="package" version="2.0.9">diamond</requirement> + <requirement type="package" version="2.12.0">blast</requirement> + <requirement type="package" version="36">blat</requirement> + <requirement type="package" version="1256">last</requirement> </requirements> </xml> <xml name="version_command"> |
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| diff -r 2e0e9c418a85 -r c3f58c2eee1e proteinortho_summary.xml --- a/proteinortho_summary.xml Tue Feb 18 17:56:58 2020 -0500 +++ b/proteinortho_summary.xml Tue Sep 14 11:39:29 2021 +0000 |
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| @@ -1,4 +1,4 @@ -<tool id="proteinortho_summary" name="Proteinortho summary" version="@TOOL_VERSION@+galaxy@WRAPPER_VERSION@"> +<tool id="proteinortho_summary" name="Proteinortho summary" version="@TOOL_VERSION@+galaxy@WRAPPER_VERSION@" profile="@PROFILE@"> <description>summaries the orthology-pairs/RBH files</description> <macros> <import>proteinortho_macros.xml</import> |