Repository 'raceid_clustering'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/raceid_clustering

Changeset 7:c4f39bf4a068 (2021-12-02)
Previous changeset 6:a4b734cd253b (2021-04-15) Next changeset 8:f911a64454fb (2021-12-20)
Commit message:
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/raceid3 commit b461ba94158cf4cc793919470b78bd3eb91312eb"
modified:
macros.xml
raceid_clustering.xml
b
diff -r a4b734cd253b -r c4f39bf4a068 macros.xml
--- a/macros.xml Thu Apr 15 18:58:21 2021 +0000
+++ b/macros.xml Thu Dec 02 16:20:43 2021 +0000
[
@@ -25,8 +25,8 @@
     return(unlist(strsplit(string,",")))
 }
     </token>
-    <token name="@VERSION_RACEID@">0.2.3</token>
-    <token name="@VERSION_WRAPPER@">0</token>
+    <token name="@TOOL_VERSION@">0.2.3</token>
+    <token name="@VERSION_SUFFIX@">1</token>
 
     <macro name="version_command_config" token_prog="temp" token_cheetah="temp2" token_out="2&#62; '$outlog'">
         <version_command><![CDATA[
@@ -47,7 +47,7 @@
 
     <macro name="requirements" >
         <requirements>
-            <requirement type="package" version="@VERSION_RACEID@" >r-raceid</requirement>
+            <requirement type="package" version="@TOOL_VERSION@" >r-raceid</requirement>
             <!-- <requirement type="package" version="1.6.2">bioconductor-scran</requirement> -->
         </requirements>
     </macro>
b
diff -r a4b734cd253b -r c4f39bf4a068 raceid_clustering.xml
--- a/raceid_clustering.xml Thu Apr 15 18:58:21 2021 +0000
+++ b/raceid_clustering.xml Thu Dec 02 16:20:43 2021 +0000
b
@@ -1,4 +1,4 @@
-<tool id="raceid_clustering" name="Clustering using RaceID" version="@VERSION_RACEID@+galaxy@VERSION_WRAPPER@" >
+<tool id="raceid_clustering" name="Clustering using RaceID" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" >
     <description>performs clustering, outlier detection, dimensional reduction</description>
     <macros>
         <import>macros.xml</import>
@@ -49,7 +49,7 @@
                 <!-- RFCorrect -->
                 <param name="nbtree" type="integer" optional="true" label="Number of trees to be built" /><!-- 0:Null -->
                 <param name="nbfactor" type="integer" min="0" value="5" label="Tree Factor" help="Number of trees based on the number of cells multiplied by this factor. Effective only if the number of trees parameter is set to 0" />
-                <param name="rfseed" type="integer" value="12345" label="Random Seed" />
+                <!-- <param name="rfseed" type="integer" value="12345" label="Random Seed" /> -->
             </expand>
         </section>
         <section name="tsne" title="tSNE, FR and UMAP" expanded="true" >