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Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_diamond_0_7_10 commit dce6fcea9c88ccc62f3a0c5d49dddda8a93527e7 |
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added:
tool_dependencies.xml |
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| diff -r 000000000000 -r c538574b1553 tool_dependencies.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Wed Dec 09 14:23:51 2015 -0500 |
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| @@ -0,0 +1,34 @@ +<?xml version="1.0"?> +<tool_dependency> + <package name="diamond" version="0.7.10"> + <install version="1.0"> + <actions_group> + <!-- Download the binaries for BLAST+ compatible with 64-bit Linux. --> + <actions os="linux" architecture="x86_64"> + <action sha256sum="db6cf64839b989306cfba752c05c192acc1bce133e0821a63e70a882d22b96aa" type="download_by_url">https://github.com/bbuchfink/diamond/releases/download/v0.7.10/diamond-linux64.tar.gz</action> + <action type="move_file"> + <source>diamond</source> + <destination>$INSTALL_DIR</destination> + </action> + </actions> + <!-- This actions tag is only processed if none of the above tags resulted in a successful installation. --> + <actions> + <action target_filename="diamond-0.7.10.tar.gz" sha256sum="a7164ce53490d6bd37ea4232778aab714d82c8b071e0969931af2fc9aa1c1ca1" type="download_by_url">https://github.com/bbuchfink/diamond/archive/v0.7.10.tar.gz</action> + <action type="shell_command"><![CDATA[ cd src && ./install-boost ]]></action> + <action type="shell_command"><![CDATA[ cd src && make ]]></action> + <action type="move_file"> + <source>bin/diamond</source> + <destination>$INSTALL_DIR</destination> + </action> + </actions> + <action type="set_environment"> + <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable> + </action> + </actions_group> + </install> + <readme>DIAMOND is a new high-throughput program for aligning a file of short reads against a protein reference database such as NR, at 20,000 times the speed of BLASTX, with high sensitivity</readme> + </package> +</tool_dependency> + + + |