Repository 'cpt_annotation_table'
hg clone https://toolshed.g2.bx.psu.edu/repos/cpt/cpt_annotation_table

Changeset 5:c618332f2386 (2024-05-24)
Previous changeset 4:9cb37bf9e298 (2024-05-24) Next changeset 6:ef05dd3eabc3 (2024-05-24)
Commit message:
planemo upload commit 8e1cddcc571bcc769e20a50cefd14053be5633d6-dirty
modified:
phage_annotation_table.xml
b
diff -r 9cb37bf9e298 -r c618332f2386 phage_annotation_table.xml
--- a/phage_annotation_table.xml Fri May 24 04:16:49 2024 +0000
+++ b/phage_annotation_table.xml Fri May 24 04:42:01 2024 +0000
b
@@ -12,13 +12,15 @@
 python '$__tool_directory__/phage_annotation_table.py'
 '$gff3_data'
 @GENOME_SELECTOR@
---types "$extraTypes"
 --reportTemplateName "$report_format"
 --annotationTableCols "$cols,$gaf_cols"
+#if $extraTypes:
+--types "$extraTypes"
+#end if
 #if $gaf_data:
 --gafData "$gaf_data"
 #end if
---searchSubs '$checkSubfeats'
+'$checkSubfeats'
 > '$output']]></command>
     <inputs>
         <expand macro="gff3_input"/>