| Previous changeset 0:07ac39c0e949 (2019-02-09) Next changeset 2:9cbddb13fb9e (2023-11-13) |
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Commit message:
planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/\mergeneighboursinlabelimage commit b2acc1845a25828181597fe5b6982fe116a7796d |
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modified:
mergeneighboursinlabelimage.py mergeneighboursinlabelimage.xml |
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| diff -r 07ac39c0e949 -r c6a6ab7c9940 mergeneighboursinlabelimage.py --- a/mergeneighboursinlabelimage.py Sat Feb 09 14:38:38 2019 -0500 +++ b/mergeneighboursinlabelimage.py Mon Jul 22 05:03:33 2019 -0400 |
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| @@ -5,7 +5,7 @@ from skimage.measure import regionprops import scipy.spatial.distance import numpy as np -import warnings +import warnings def merge_n(img, dist=50): props = regionprops(img) |
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| diff -r 07ac39c0e949 -r c6a6ab7c9940 mergeneighboursinlabelimage.xml --- a/mergeneighboursinlabelimage.xml Sat Feb 09 14:38:38 2019 -0500 +++ b/mergeneighboursinlabelimage.xml Mon Jul 22 05:03:33 2019 -0400 |
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| @@ -1,10 +1,11 @@ -<tool id="ip_merge_neighbours_in_label" name="Merge Neighbours in Label" version="0.2"> +<tool id="ip_merge_neighbours_in_label" name="Merge Neighbours in Label" version="0.3"> <description>Merge Neighbours in Label Image</description> <requirements> <requirement type="package" version="0.14.2">scikit-image</requirement> <requirement type="package" version="1.15.4">numpy</requirement> + <requirement type="package" version="0.15.1">tifffile</requirement> </requirements> - <command> + <command detect_errors="aggressive"> <![CDATA[ python '$__tool_directory__/mergeneighboursinlabelimage.py' '$input' ./tmp.tiff -c $c ]]> @@ -21,7 +22,7 @@ <param name="input" value="galaxyIcon_noText.tif"/> <param name="c" value="10"/> <output name="output" file="out.tiff" ftype="tiff" compare="sim_size"/> - </test> + </test> </tests> <help> **What it does** |