| Previous changeset 3:9cc1138e5e3e (2015-10-02) Next changeset 5:842bb2f02723 (2016-05-02) |
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Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_numpy_1_9 commit 2249d643284ee782d882cd200729a86a2c6bb744 |
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modified:
tool_dependencies.xml |
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| diff -r 9cc1138e5e3e -r c8f7a7d73466 tool_dependencies.xml --- a/tool_dependencies.xml Fri Oct 02 09:10:47 2015 -0400 +++ b/tool_dependencies.xml Thu Dec 31 14:01:41 2015 -0500 |
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| @@ -3,28 +3,30 @@ <package name="atlas" version="3.10.2"> <repository changeset_revision="0538fd672119" name="package_atlas_3_10" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> </package> + <package name="python" version="2.7"> + <repository changeset_revision="8b09fe018cac" name="package_python_2_7" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> + </package> <package name="numpy" version="1.9"> <install version="1.0"> <actions> - <action type="download_by_url">https://pypi.python.org/packages/source/n/numpy/numpy-1.9.0.tar.gz#md5#510cee1c6a131e0a9eb759aa2cc62609</action> - <action type="make_directory">$INSTALL_DIR/lib/python</action> <action type="set_environment_for_install"> <repository changeset_revision="0538fd672119" name="package_atlas_3_10" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> <package name="atlas" version="3.10.2" /> </repository> </action> - <action type="shell_command"> - export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python && - export ATLAS=$ATLAS_ROOT_PATH && - python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin + <action type="setup_python_environment"> + <repository changeset_revision="8b09fe018cac" name="package_python_2_7" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> + <package name="python" version="2.7" /> + </repository> + <package md5sum="78842b73560ec378142665e712ae4ad9">https://pypi.python.org/packages/source/n/numpy/numpy-1.9.1.tar.gz</package> </action> <action type="set_environment"> <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable> - <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable> <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$ENV[ATLAS_LIB_DIR]</environment_variable> - <environment_variable action="set_to" name="PYTHONPATH_NUMPY">$INSTALL_DIR</environment_variable> + <environment_variable action="set_to" name="PYTHONPATH_NUMPY">$INSTALL_DIR/lib/python</environment_variable> <environment_variable action="set_to" name="PATH_NUMPY">$INSTALL_DIR/bin</environment_variable> + <environment_variable action="set_to" name="NUMPY_ROOT_DIR">$INSTALL_DIR</environment_variable> </action> </actions> </install> |