| Previous changeset 4:77e29e6a6101 (2016-09-26) Next changeset 6:d7aeb194291f (2017-04-06) |
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Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks commit 9401451df4a985ef5686864eaadafa077ffc0877 |
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modified:
macros.xml stacks_pstacks.xml |
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| diff -r 77e29e6a6101 -r c9413b0ba604 macros.xml --- a/macros.xml Mon Sep 26 11:45:03 2016 -0400 +++ b/macros.xml Mon Feb 27 05:44:24 2017 -0500 |
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| @@ -38,9 +38,9 @@ **Project links:** -`Stacks website <http://creskolab.uoregon.edu/stacks/>`_ +`Stacks website <http://catchenlab.life.illinois.edu/stacks/>`_ -`Stacks manual <http://creskolab.uoregon.edu/stacks/stacks_manual.pdf>`_ +`Stacks manual <http://catchenlab.life.illinois.edu/stacks/manual/>`_ `Stacks google group <http://groups.google.com/group/stacks-users>`_ ]]></token> |
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| diff -r 77e29e6a6101 -r c9413b0ba604 stacks_pstacks.xml --- a/stacks_pstacks.xml Mon Sep 26 11:45:03 2016 -0400 +++ b/stacks_pstacks.xml Mon Feb 27 05:44:24 2017 -0500 |
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| @@ -13,7 +13,7 @@ && - #if $sample.ext == "sam": + #if $sample.is_of_type('sam'): #set $data_path = splitext($sample.element_identifier)[0] #set $data_path = re.sub(r'\.1$', '', $data_path) #set $data_path = "stacks_inputs/" + $data_path + ".sam" |