| Previous changeset 20:1759d845181e (2018-09-25) Next changeset 22:af814359d244 (2019-01-07) |
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Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/featurecounts commit a956e32b176d645db54db3c86586cc0bfa2fbd3c |
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modified:
featurecounts.xml |
| b |
| diff -r 1759d845181e -r c946f28be33b featurecounts.xml --- a/featurecounts.xml Tue Sep 25 04:28:33 2018 -0400 +++ b/featurecounts.xml Fri Jan 04 06:29:41 2019 -0500 |
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| @@ -1,8 +1,9 @@ -<tool id="featurecounts" name="featureCounts" version="1.6.3" profile="16.04"> +<tool id="featurecounts" name="featureCounts" version="1.6.3+galaxy1" profile="16.04"> <description>Measure gene expression in RNA-Seq experiments from SAM or BAM files.</description> <requirements> - <requirement type="package" version="1.6.2">subread</requirement> - <requirement type="package" version="1.7">samtools</requirement> + <requirement type="package" version="1.6.3">subread</requirement> + <requirement type="package" version="1.9">samtools</requirement> + <requirement type="package" version="3.0.5">paste</requirement> </requirements> <version_command>featureCounts -v 2>&1 | grep .</version_command> @@ -553,7 +554,7 @@ <section name="extended_parameters" > <param name="R" value="true" /> </section> - <output name="output_bam" value="subset.sorted.featurecounts.bam" /> + <output name="output_bam" value="subset.sorted.featurecounts.bam" compare="sim_size"/> </test> </tests> |