| Previous changeset 8:a4fac23fb420 (2013-07-10) Next changeset 10:83cb434254fb (2013-07-10) |
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Commit message:
Uploaded |
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added:
tool_dependencies.xml |
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| diff -r a4fac23fb420 -r c97f0bedb674 tool_dependencies.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Wed Jul 10 17:46:01 2013 -0400 |
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| @@ -0,0 +1,19 @@ +<?xml version="1.0"?> +<tool_dependency> + <package name="vcftools" version="0.1.11"> + <install version="1.0"> + <actions> + <action type="download_by_url">http://sourceforge.net/projects/vcftools/files/vcftools_0.1.11.tar.gz</action> + <action type="shell_command">make</action> + <action type="shell_command">PREFIX="$INSTALL_DIR/vcftools make install</action> + <action type="set_environment"> + <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/vcftools/bin</environment_variable> + </action> + </actions> + </install> + <readme> + A set of tools written in Perl and C++ for working with VCF files, such as those generated by the 1000 Genomes Project + </readme> + </package> + +</tool_dependency> |