| Previous changeset 6:71214d6034e7 (2018-03-19) Next changeset 8:2df5166efebb (2018-03-23) |
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Commit message:
planemo upload commit 6b011549498a096af60a494bc39c1a2078580a5a-dirty |
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modified:
add_expression_HPA.R expression_rnaseq_abbased.xml |
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| diff -r 71214d6034e7 -r c9943f867413 add_expression_HPA.R --- a/add_expression_HPA.R Mon Mar 19 10:09:01 2018 -0400 +++ b/add_expression_HPA.R Tue Mar 20 10:46:46 2018 -0400 |
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| @@ -65,7 +65,7 @@ inputtype = args$inputtype if (inputtype == "copypaste") { - input = strsplit(args$input, " ")[[1]] + input = strsplit(args$input, "[ \t\n]+")[[1]] } else if (inputtype == "tabfile") { filename = args$input |
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| diff -r 71214d6034e7 -r c9943f867413 expression_rnaseq_abbased.xml --- a/expression_rnaseq_abbased.xml Mon Mar 19 10:09:01 2018 -0400 +++ b/expression_rnaseq_abbased.xml Tue Mar 20 10:46:46 2018 -0400 |
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| @@ -30,7 +30,16 @@ <option value="copy_paste">Copy/paste your list of IDs</option> </param> <when value="copy_paste"> - <param name="genelist" type="text" label="Enter a list of identifiers"/> + <param name="genelist" type="text" label="Enter a list of identifiers"> + <sanitizer> + <valid initial="string.printable"> + <remove value="'"/> + </valid> + <mapping initial="none"> + <add source="'" target="__sq__"/> + </mapping> + </sanitizer> + </param> </when> <when value="file_all"> <param name="genelist" type="data" format="txt,tabular" label="Choose your file" help="This file must imperatively have 1 column filled with Ensembl Gene IDs (ENSG). Please use the ID_Converter tool if this is not the case."/> |