| Previous changeset 1:df211f6b5cf2 (2024-04-04) |
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Commit message:
planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/orientationpy commit c86a1b93cb7732f7331a981d13465653cc1a2790 |
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modified:
orientationpy-cli.py orientationpy.xml |
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| diff -r df211f6b5cf2 -r cc8fe984ec3e orientationpy-cli.py --- a/orientationpy-cli.py Thu Apr 04 15:25:49 2024 +0000 +++ b/orientationpy-cli.py Wed Apr 24 08:12:45 2024 +0000 |
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| @@ -1,6 +1,7 @@ import argparse import csv +import giatools.io import numpy as np import orientationpy import skimage.io @@ -19,7 +20,7 @@ parser.add_argument('--output_angle_tsv', type=str, default=None) args = parser.parse_args() - im = skimage.io.imread(args.input) + im = giatools.io.imread(args.input) im = skimage.util.img_as_float(im) im = np.squeeze(im) assert im.ndim == 2 |
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| diff -r df211f6b5cf2 -r cc8fe984ec3e orientationpy.xml --- a/orientationpy.xml Thu Apr 04 15:25:49 2024 +0000 +++ b/orientationpy.xml Wed Apr 24 08:12:45 2024 +0000 |
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| @@ -3,7 +3,7 @@ <macros> <import>creators.xml</import> <token name="@TOOL_VERSION@">0.2.0.4</token> - <token name="@VERSION_SUFFIX@">1</token> + <token name="@VERSION_SUFFIX@">2</token> </macros> <creator> <expand macro="creators/bmcv"/> @@ -17,6 +17,7 @@ <requirements> <requirement type="package" version="@TOOL_VERSION@">orientationpy</requirement> <requirement type="package" version="0.22.0">scikit-image</requirement> + <requirement type="package" version="0.1">giatools</requirement> </requirements> <command><![CDATA[ |