Repository 'suite_mothur'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/suite_mothur

Changeset 12:ccf54b10c308 (2020-11-26)
Previous changeset 11:ab9a91d5f796 (2020-11-06) Next changeset 13:a8aba90dc716 (2020-12-08)
Commit message:
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mothur commit f20b079c868afb2decc111751312b7f2a43f1dfd"
modified:
repository_dependencies.xml
b
diff -r ab9a91d5f796 -r ccf54b10c308 repository_dependencies.xml
--- a/repository_dependencies.xml Fri Nov 06 00:14:25 2020 +0000
+++ b/repository_dependencies.xml Thu Nov 26 04:46:05 2020 +0000
b
b'@@ -1,132 +1,132 @@\n <?xml version="1.0" ?>\n <repositories description="A suite of tools designed to bring the mothur project into Galaxy.">\n-    <repository owner="iuc" name="mothur_make_contigs" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="ab12df91b47f"/>\n-    <repository owner="iuc" name="mothur_sens_spec" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="b36825c79054"/>\n-    <repository owner="iuc" name="mothur_reverse_seqs" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="0ca1d45851ee"/>\n-    <repository owner="iuc" name="mothur_remove_lineage" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="c03e5575b636"/>\n+    <repository owner="iuc" name="mothur_make_group" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="c7ac82d16b14"/>\n+    <repository owner="iuc" name="mothur_classify_seqs" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="36ef18cf868b"/>\n+    <repository owner="iuc" name="mothur_get_groups" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="506e6a44cc68"/>\n+    <repository owner="iuc" name="mothur_pcr_seqs" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="4dbfdaaa6a05"/>\n     <repository owner="iuc" name="mothur_make_fastq" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="97587d4961a0"/>\n-    <repository owner="iuc" name="mothur_merge_sfffiles" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="b296d6f25ee3"/>\n-    <repository owner="iuc" name="mothur_tree_shared" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="bf740ca1752a"/>\n-    <repository owner="iuc" name="mothur_heatmap_sim" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="4e5640d04cab"/>\n-    <repository owner="iuc" name="mothur_get_label" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="c0a77971f496"/>\n-    <repository owner="iuc" name="mothur_shhh_seqs" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="e963609595cc"/>\n-    <repository owner="iuc" name="mothur_amova" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="b0b3fa851bba"/>\n-    <repository owner="iuc" name="mothur_cluster_fragments" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="d1cb34c1bfa3"/>\n-    <repository owner="iuc" name="mothur_get_rabund" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="8ddccb25fcc6"/>\n-    <repository owner="iuc" name="mothur_remove_otus" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="d0b2ec5b9a25"/>\n-    <repository owner="iuc" name="mothur_sort_seqs" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="d4c2eccb4f69"/>\n-    <repository owner="iuc" name="mothur_count_groups" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="14a1358d0846"/>\n-    <repository owner="iuc" name="mothur_sub_sample" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="6c9215917d76"/>\n-    <repository owner="iuc" name="mothur_otu_hierarchy" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="0161571cd8f8"/>\n-    <repository owner="iuc" name="mothur_summary_seqs" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="1a8e53763086"/>\n-    <repository owner="iuc" name="mothur_unifrac_weighted" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="bf4b64c7d3e8"/>\n-    <repository owner="iuc" name="mothur_bin_seqs" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="b2f3203aeba9"/>\n+    <repository owner="iuc" name="mothur_align_seqs" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="02ba09e31d94"/>\n+    <repository owner="iuc" name="mothur_chimera_uchime" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="4de76e144252"/>\n+    <repository owner="iuc" name="mothur_nmds" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="f65e0350ef5d"/>\n+    <repository owner="iuc" name="mothur_mimarks_attributes" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="5106f3ce22a3"/>'..b'ed="https://toolshed.g2.bx.psu.edu" changeset_revision="fae57cd6cc12"/>\n     <repository owner="iuc" name="mothur_heatmap_bin" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="416182d7281c"/>\n-    <repository owner="iuc" name="mothur_pairwise_seqs" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="6adf5871ec0b"/>\n-    <repository owner="iuc" name="mothur_get_otulist" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="903acbb547c0"/>\n-    <repository owner="iuc" name="mothur_merge_count" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="7848890f9df7"/>\n-    <repository owner="iuc" name="mothur_align_check" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="ac003c0de94f"/>\n+    <repository owner="iuc" name="mothur_phylotype" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="e301ed7e04d8"/>\n+    <repository owner="iuc" name="mothur_create_database" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="e7e2fd373e8b"/>\n+    <repository owner="iuc" name="mothur_summary_seqs" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="1a8e53763086"/>\n+    <repository owner="iuc" name="mothur_get_coremicrobiome" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="820a106991a5"/>\n+    <repository owner="iuc" name="mothur_make_biom" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="b0605e49d01c"/>\n+    <repository owner="iuc" name="mothur_chimera_pintail" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="2960e484721c"/>\n+    <repository owner="iuc" name="mothur_unifrac_unweighted" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="dd62ea340aa7"/>\n+    <repository owner="iuc" name="mothur_mantel" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="1ef479343cfe"/>\n+    <repository owner="iuc" name="mothur_make_contigs" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="829bb93d3add"/>\n+    <repository owner="iuc" name="mothur_get_group" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="467378f04253"/>\n+    <repository owner="iuc" name="mothur_shhh_seqs" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="e963609595cc"/>\n+    <repository owner="iuc" name="mothur_parse_list" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="accd70ff66e6"/>\n     <repository owner="iuc" name="mothur_filter_seqs" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="daccf69bc281"/>\n-    <repository owner="iuc" name="mothur_collect_single" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="9ee1a391ed43"/>\n-    <repository owner="iuc" name="mothur_dist_shared" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="342a2b68ec4f"/>\n-    <repository owner="iuc" name="mothur_make_group" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="c7ac82d16b14"/>\n-    <repository owner="iuc" name="mothur_chimera_pintail" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="2960e484721c"/>\n-    <repository owner="iuc" name="mothur_indicator" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="b876b3c1690b"/>\n-    <repository owner="iuc" name="mothur_get_group" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="467378f04253"/>\n-    <repository owner="iuc" name="mothur_list_otulabels" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="5e366a0379e6"/>\n-    <repository owner="iuc" name="mothur_classify_tree" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="712115617d17"/>\n-    <repository owner="iuc" name="mothur_create_database" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="e7e2fd373e8b"/>\n-    <repository owner="iuc" name="mothur_make_shared" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="fdebbe239529"/>\n+    <repository owner="iuc" name="mothur_chimera_check" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="9f954eb03dc3"/>\n </repositories>\n\\ No newline at end of file\n'