Repository 'btyper'
hg clone https://toolshed.g2.bx.psu.edu/repos/estrain/btyper

Changeset 3:ccf77a06a46e (2017-12-08)
Previous changeset 2:f020afe9e4b7 (2017-12-08) Next changeset 4:a9ce62479e43 (2017-12-08)
Commit message:
Changed python code to put assembly name in the output file
modified:
btyper-2.0.3/btyper
b
diff -r f020afe9e4b7 -r ccf77a06a46e btyper-2.0.3/btyper
--- a/btyper-2.0.3/btyper Fri Dec 08 09:50:34 2017 -0500
+++ b/btyper-2.0.3/btyper Fri Dec 08 09:51:02 2017 -0500
b
@@ -186,7 +186,7 @@
  finalfile_string=key.strip()+"_final_results.txt"
  if not os.path.isfile(oarg+"btyper_final_results/"+finalfile_string):
  finalfile=open(oarg+"btyper_final_results/"+finalfile_string,"a")
- print >> finalfile, "BTyper Results for "+key
+ print >> finalfile, "BTyper Results for "+os.path.basename(iarg)
  print >> finalfile, ""
  finalfile.close()
  if not os.path.isdir(oarg+"btyper_final_results/genefiles"):