| Previous changeset 6:11377edbbea2 (2017-10-16) |
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Commit message:
Uploaded |
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modified:
01_RemoveSNPs/RemoveSNPs.xml |
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| diff -r 11377edbbea2 -r cd9c123ab04f 01_RemoveSNPs/RemoveSNPs.xml --- a/01_RemoveSNPs/RemoveSNPs.xml Mon Oct 16 14:12:23 2017 -0400 +++ b/01_RemoveSNPs/RemoveSNPs.xml Mon Oct 16 14:20:00 2017 -0400 |
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| @@ -2,18 +2,18 @@ <requirements> </requirements> <command detect_errors="exit_code"><![CDATA[ - bash $__tool_directory__/RemoveSNPs "$SAM alignment files" 3 > "$output1" + bash $__tool_directory__/RemoveSNPs "$SAM_files" "$SNPs_allowed" > "$output1" ]]></command> <inputs> - <param type="data" name="SAM alignment files" format="sam" /> - <param type="integer" name="SNPs/ mismatches allowed" value="3" /> + <param type="data" name="SAM_files" format="sam" /> + <param type="integer" name="SNPs_allowed" value="3" /> </inputs> <outputs> <data name="output1" format="sam" /> </outputs> <tests> <test> - <param name="SAM alignment files" value="input.sam"/> + <param name="SAM_files" value="input.sam"/> <output name="output1" file="output.sam"/> </test> </tests> |