| Previous changeset 4:58f9cf0de6d4 (2017-08-23) Next changeset 6:4b7d768b74d3 (2017-10-27) |
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Commit message:
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit a030bdf85b5d74b7c1a16926322e47154b120fea |
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modified:
msgfplus.xml |
| b |
| diff -r 58f9cf0de6d4 -r ce4882b95b73 msgfplus.xml --- a/msgfplus.xml Wed Aug 23 05:47:29 2017 -0400 +++ b/msgfplus.xml Wed Sep 13 15:57:41 2017 -0400 |
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| @@ -1,4 +1,4 @@ -<tool id="msgfplus" name="MS-GF+" version="0.2"> +<tool id="msgfplus" name="MS-GF+" version="0.3"> <description> Identifies peptides in tandem mass spectra using the MS-GF+ search engine. </description> @@ -20,7 +20,7 @@ ln -s '$msgf_input.d' '${db_name}' && #else if $msgf_input.intype_selector == "fractions" #set $db_name = $msgf_input.db_spectra.reverse.element_identifier.replace(".fasta", "") + ".fasta" - #set $input_name = $msgf_input.db_spectra.forward.element_identifier.replace(".mzML", "") + ".mzML" + #set $input_name = $msgf_input.db_spectra.name.replace(".mzML", "") + ".mzML" ln -s '$msgf_input.db_spectra.forward' '${input_name}' && ln -s '$msgf_input.db_spectra.reverse' '${db_name}' && #end if |