| Previous changeset 14:883e6381ba29 (2018-05-23) Next changeset 16:ea67840d0514 (2018-05-23) |
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Commit message:
planemo upload for repository https://github.com/monikaheinzl/galaxyProject/tree/master/tools/hd commit 7414caec3ddba5c7b0ed8598811aab321720b088 |
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modified:
hd.py hd.xml |
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| diff -r 883e6381ba29 -r cf7874bb4934 hd.py --- a/hd.py Wed May 23 14:14:10 2018 -0400 +++ b/hd.py Wed May 23 14:23:00 2018 -0400 |
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| @@ -906,7 +906,7 @@ ########################## Plot HD within tags ######################################################## ###################################################################################################################### # plotHDwithinSeq_Sum2(HDhalf1, HDhalf2, minHDs, pdf=pdf, lenTags=lenTags, title_file1=name_file) - plotHDwithinSeq_Sum2(HDhalf1, HDhalf2, HDhalf1min, HDhalf2min, minHDs, pdf=pdf, lenTags=lenTags, title_file1=name_file) + plotHDwithinSeq_Sum2(HDhalf1, HDhalf1min,HDhalf2min, HDhalf2 , minHDs, pdf=pdf, lenTags=lenTags, title_file1=name_file) ########################## Plot difference between HD's separated after FSD #################################### |
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| diff -r 883e6381ba29 -r cf7874bb4934 hd.xml --- a/hd.xml Wed May 23 14:14:10 2018 -0400 +++ b/hd.xml Wed May 23 14:23:00 2018 -0400 |
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| @@ -1,5 +1,5 @@ <?xml version="1.0" encoding="UTF-8"?> -<tool id="hd" name="Duplex Sequencing Analysis: hd" version="0.0.15"> +<tool id="hd" name="Duplex Sequencing Analysis: hd" version="0.0.16"> <requirements> <requirement type="package" version="2.7">python</requirement> <requirement type="package" version="1.4">matplotlib</requirement> @@ -22,7 +22,7 @@ <param name="onlyDCS" type="boolean" label="only DCS in the analysis?" truevalue="" falsevalue="--only_DCS" checked="False" help="Only tags, which have a partner tag in the dataset, are included in the analysis."/> <param name="subsetTag" type="integer" label="shorten tag in the analysis?" value="0" help="An analysis with shorter tag length, which is specified by this parameter, is simulated. If this parameter is 0 (by default), the tag with its original length is used in the analysis."/> <param name="nproc" type="integer" label="number of processors" value="8" help="Number of processor used for computing."/> - <param name="nr_above_bars" type="boolean" label="include numbers above bars?" truevalue="" falsevalue="--nr_above_bars" checked="False" help="The absolute and relative values of the bar can be included or removed in the plot. "/> + <param name="nr_above_bars" type="boolean" label="include numbers above bars?" truevalue="--nr_above_bars" falsevalue="" checked="False" help="The absolute and relative values of the bar can be included or removed in the plot. "/> </inputs> <outputs> |