| Previous changeset 12:ac0235d2d459 (2015-09-17) Next changeset 14:5c852eca82e0 (2018-02-28) |
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Commit message:
planemo upload for repository https://github.com/blankenberg/tools-blankenberg/tree/master/tools/naive_variant_caller commit 470c2ac7bfb061e09dfe88ea61d2b8b53d041413 |
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modified:
dependency_configs/tool_dependencies.xml tools/naive_variant_caller.xml |
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| diff -r ac0235d2d459 -r cfc86c3fc5c8 dependency_configs/tool_dependencies.xml --- a/dependency_configs/tool_dependencies.xml Thu Sep 17 14:56:15 2015 -0400 +++ b/dependency_configs/tool_dependencies.xml Fri Feb 17 11:42:07 2017 -0500 |
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| @@ -4,9 +4,9 @@ <repository changeset_revision="300877695495" name="package_numpy_1_7" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> </package> <package name="pyBamParser" version="0.0.1"> - <repository changeset_revision="a0fb4b5a1679" name="package_pybamparser_0_0_1" owner="blankenberg" toolshed="https://toolshed.g2.bx.psu.edu" /> + <repository changeset_revision="144681ee972c" name="package_pybamparser_0_0_1" owner="blankenberg" toolshed="https://toolshed.g2.bx.psu.edu" /> </package> <package name="pyBamTools" version="0.0.2"> - <repository changeset_revision="38fc6b348c17" name="package_pybamtools_0_0_2" owner="blankenberg" toolshed="https://toolshed.g2.bx.psu.edu" /> + <repository changeset_revision="6819855ac2e8" name="package_pybamtools_0_0_2" owner="blankenberg" toolshed="https://toolshed.g2.bx.psu.edu" /> </package> </tool_dependency> |
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| diff -r ac0235d2d459 -r cfc86c3fc5c8 tools/naive_variant_caller.xml --- a/tools/naive_variant_caller.xml Thu Sep 17 14:56:15 2015 -0400 +++ b/tools/naive_variant_caller.xml Fri Feb 17 11:42:07 2017 -0500 |
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| @@ -199,11 +199,6 @@ | uint64 | 18,446,744,073,709,551,615 | +--------+----------------------------+ ------- - -**Citation** - -If you use this tool, please cite Blankenberg D, et al. *In preparation.* </help> <tests> @@ -223,5 +218,9 @@ <output name="output_vcf" file="fake_phiX174_reads_1_test_out_1.vcf" compare="contains" /> </test> </tests> - + + <citations> + <citation type="doi">10.1186/gb4161</citation> + </citations> + </tool> |