| Previous changeset 8:f036e2d66c85 (2016-02-25) Next changeset 10:7f8d888e3355 (2016-02-25) |
|
Commit message:
planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/goseq_1_22_0 commit fdd0811efc61c31f88ff17096fbe8ee8cfacd766-dirty |
|
modified:
get_length_and_gc_content.xml |
| b |
| diff -r f036e2d66c85 -r d1eed994287a get_length_and_gc_content.xml --- a/get_length_and_gc_content.xml Thu Feb 25 06:14:09 2016 -0500 +++ b/get_length_and_gc_content.xml Thu Feb 25 06:16:23 2016 -0500 |
| b |
| @@ -7,9 +7,9 @@ <command interpreter="Rscript"> get_length_and_gc_content.r --gtf "$gtf" #if $fastaSource.genomeSource == "indexed": - --fasta "$fastaSource.fasta.fields.path" + --fasta "$fastaSource.fasta_pre_installed.fields.path" #else: - --fasta "$fastaSource.fasta" + --fasta "$fastaSource.fasta_history" #end if --output "output" </command> @@ -21,12 +21,12 @@ <option value="history">Use fasta from history</option> </param> <when value="indexed"> - <param help="Select the fasta file from a list of pre-installed genomes" label="Select a fasta sequence" name="fasta" type="select"> + <param help="Select the fasta file from a list of pre-installed genomes" label="Select a fasta sequence" name="fasta_pre_installed" type="select"> <options from_data_table="all_fasta"/> </param> </when> <when value="history"> - <param format="fasta" label="Select a fasta file, to serve as index reference" name="fasta" type="data" /> + <param format="fasta_history" label="Select a fasta file, to serve as index reference" name="fasta" type="data" /> </when> </conditional> </inputs> |