| Previous changeset 3:0938217b3221 (2019-06-18) Next changeset 5:8fdb079ddaf0 (2020-05-29) |
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Commit message:
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/nanopolish commit 25c22b467760e4784e199125292927bd2274a189-dirty |
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modified:
nanopolish_eventalign.xml |
| b |
| diff -r 0938217b3221 -r d219b6d8158a nanopolish_eventalign.xml --- a/nanopolish_eventalign.xml Tue Jun 18 12:42:00 2019 -0400 +++ b/nanopolish_eventalign.xml Sun Jun 23 05:36:00 2019 -0400 |
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| @@ -1,4 +1,4 @@ -<tool id="nanopolish_eventalign" name="Nanopolish eventalign" version="0.1.0"> +<tool id="nanopolish_eventalign" name="Nanopolish eventalign" version="0.11.1"> <description>- Align nanopore events to reference k-mers</description> <macros> <import>macros.xml</import> @@ -67,7 +67,7 @@ <inputs> <!-- index inputs --> <param type="data" name="input_merged" format="fasta,fastq" label="Basecalled merged reads.fa"/> - <param type="data" name="input_reads_raw" format="h5,fast5.tar.gz,fast5.tar.bz2,fast5.tar" label="Flat archive file of raw fast5 files"/> + <param type="data" name="input_reads_raw" format="fast5.tar.gz,fast5.tar.bz2,fast5.tar" label="Flat archive file of raw fast5 files"/> <!-- variants consensus inputs --> <param type="data" argument="-b" format="bam" label="Reads aligned to the reference genome" /> @@ -161,8 +161,8 @@ <param name="input_merged" ftype="fasta" value="reads.fasta" /> <param name="input_reads_raw" ftype="fast5.tar.gz" value="fast5_files.tar.gz" /> <param name="b" value="reads.sorted.bam" /> - <param name="reference_source_selector" value="cached" /> - <param name="ref_file" value="draft"/> + <param name="reference_source_selector" value="history" /> + <param name="ref_file" value="draft.fa"/> <param name="w" value="tig00000001:200000-200010" /> <param name="sam" value="false" /> <param name="summary" value="false" /> |