Repository 'bioext_bealign'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/bioext_bealign

Changeset 11:d3ece1957fdb (2025-10-10)
Previous changeset 10:4ad7321205c9 (2024-09-02)
Commit message:
planemo upload for repository https://github.com/davebx/bioext-gx/ commit e5a0f251aae89a83d154836029701bbf1c5a17fe
modified:
bealign.xml
macros.xml
b
diff -r 4ad7321205c9 -r d3ece1957fdb bealign.xml
--- a/bealign.xml Mon Sep 02 10:14:49 2024 +0000
+++ b/bealign.xml Fri Oct 10 13:29:05 2025 +0000
b
@@ -4,8 +4,8 @@
         <import>macros.xml</import>
     </macros>
     <expand macro="requirements">
-        <requirement type="package" version="5.3.0">gawk</requirement>
-        <requirement type="package" version="1.20">samtools</requirement>
+        <requirement type="package" version="5.3.1">gawk</requirement>
+        <requirement type="package" version="1.22.1">samtools</requirement>
     </expand>
     <version_command>bealign --version</version_command>
     <command detect_errors="exit_code">
b
diff -r 4ad7321205c9 -r d3ece1957fdb macros.xml
--- a/macros.xml Mon Sep 02 10:14:49 2024 +0000
+++ b/macros.xml Fri Oct 10 13:29:05 2025 +0000
[
@@ -1,6 +1,6 @@
 <?xml version="1.0"?>
 <macros>
-    <token name="@TOOL_VERSION@">0.21.9</token>
+    <token name="@TOOL_VERSION@">0.21.10</token>
     <token name="@VERSION_SUFFIX@">0</token>
     <token name="@PROFILE@">22.05</token>
     <token name="@SANITIZE@"><![CDATA[| gawk '{ if (\$0 ~ "^[^>]") {a = gensub(/[^ACGTURYKMSWBDHVNacgturykmswbdhvn?-]/, "", "g"); } else {a=gensub(/[^>A-Za-z0-9_]/, "_", "g"); }; print a } ' | sed 's,_\\+,_,g' >]]></token>