| Previous changeset 3:dae123c03a74 (2016-11-10) Next changeset 5:de2c5e5a206c (2017-02-15) |
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Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/featurecounts commit 57dfb61ba50ecfbe8f1c624fdbe2d0a3a8deaa04 |
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modified:
featurecounts.xml |
| b |
| diff -r dae123c03a74 -r d417fb66494e featurecounts.xml --- a/featurecounts.xml Thu Nov 10 03:05:17 2016 -0500 +++ b/featurecounts.xml Thu Jan 26 12:33:53 2017 -0500 |
| b |
| @@ -386,7 +386,9 @@ <param name="format" value="tabdel_short" /> <param name="include_feature_length_file" value="true"/> <param name="ref_source" value="history" /> - <output name="output" file="output_1_short.tab"/> + <output name="output_short" file="output_1_short.tab"> + <metadata name="column_names" value="Geneid,featureCounts_input1.bam"/> + </output> <output name="output_summary" file="output_1_summary.tab"/> </test> <test> @@ -395,8 +397,12 @@ <param name="format" value="tabdel_medium" /> <param name="include_feature_length_file" value="true"/> <param name="ref_source" value="history" /> - <output name="output" file="output_1_medium.tab"/> - <output name="output_summary" file="output_1_summary.tab"/> + <output name="output_medium" file="output_1_medium.tab"> + <metadata name="column_names" value="Geneid,featureCounts_input1.bam,Length"/> + </output> + <output name="output_summary" file="output_1_summary.tab"> + <metadata name="column_names" value="Status,featureCounts_input1.bam"/> + </output> </test> <test> <param name="alignment" value="featureCounts_input1.bam" ftype="bam" /> @@ -404,9 +410,15 @@ <param name="format" value="tabdel_full" /> <param name="include_feature_length_file" value="true"/> <param name="ref_source" value="history" /> - <output name="output" file="output_1_full.tab"/> - <output name="output_summary" file="output_1_summary.tab"/> - <output name="output_feature_lengths" file="output_feature_lengths.tab"/> + <output name="output_full" file="output_1_full.tab"> + <metadata name="column_names" value="Geneid,Chr,Start,End,Strand,Length,featureCounts_input1.bam"/> + </output> + <output name="output_summary" file="output_1_summary.tab"> + <metadata name="column_names" value="Status,featureCounts_input1.bam"/> + </output> + <output name="output_feature_lengths" file="output_feature_lengths.tab"> + <metadata name="column_names" value="Feature,Length"/> + </output> </test> <test> @@ -415,8 +427,12 @@ <param name="format" value="tabdel_short" /> <param name="include_feature_length_file" value="true"/> <param name="ref_source" value="history" /> - <output name="output" file="output_2_short.tab"/> - <output name="output_summary" file="output_2_summary.tab"/> + <output name="output_short" file="output_2_short.tab"> + <metadata name="column_names" value="Geneid,featureCounts_input1.bam"/> + </output> + <output name="output_summary" file="output_2_summary.tab"> + <metadata name="column_names" value="Status,featureCounts_input1.bam"/> + </output> </test> <test> <param name="alignment" value="featureCounts_input1.bam" ftype="bam" /> @@ -424,8 +440,12 @@ <param name="format" value="tabdel_medium" /> <param name="include_feature_length_file" value="true"/> <param name="ref_source" value="history" /> - <output name="output" file="output_2_medium.tab"/> - <output name="output_summary" file="output_2_summary.tab"/> + <output name="output_medium" file="output_2_medium.tab"> + <metadata name="column_names" value="Geneid,featureCounts_input1.bam,Length"/> + </output> + <output name="output_summary" file="output_2_summary.tab"> + <metadata name="column_names" value="Status,featureCounts_input1.bam"/> + </output> </test> <test> <param name="alignment" value="featureCounts_input1.bam" ftype="bam" /> @@ -433,9 +453,15 @@ <param name="format" value="tabdel_full" /> <param name="include_feature_length_file" value="true"/> <param name="ref_source" value="history" /> - <output name="output" file="output_2_full.tab"/> - <output name="output_summary" file="output_2_summary.tab"/> - <output name="output_feature_lengths" file="output_feature_lengths.tab"/> + <output name="output_full" file="output_2_full.tab"> + <metadata name="column_names" value="Geneid,Chr,Start,End,Strand,Length,featureCounts_input1.bam"/> + </output> + <output name="output_summary" file="output_2_summary.tab"> + <metadata name="column_names" value="Status,featureCounts_input1.bam"/> + </output> + <output name="output_feature_lengths" file="output_feature_lengths.tab"> + <metadata name="column_names" value="Feature,Length"/> + </output> </test> </tests> |