| Previous changeset 4:866cd9ce1cbd (2015-11-02) Next changeset 6:3a352cb57117 (2015-11-06) |
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Commit message:
update output file |
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modified:
vcf_to_snp.xml |
| b |
| diff -r 866cd9ce1cbd -r d5725351bf22 vcf_to_snp.xml --- a/vcf_to_snp.xml Mon Nov 02 19:42:35 2015 -0500 +++ b/vcf_to_snp.xml Mon Nov 02 19:42:54 2015 -0500 |
| b |
| @@ -1,4 +1,4 @@ -<tool id="vcf_snp" name="vcf to snp" version="0.2"> +<tool id="vcf_snp" name="vcf to snp" version="0.3"> <description>vcf to snp for fasta</description> <requirements> <!-- Should just use the filter snp that's installed in the path --> @@ -9,7 +9,7 @@ ## Lines starting hash hash are comments. Galaxy will turn newlines into spaces ## ! We only have a simple single command here. - <command interpreter="python"> + <command interpreter="/usr/local/anaconda/bin/python"> vcf_snp.py -s ${vcf} -o output.txt @@ -22,7 +22,7 @@ </inputs> <outputs> - <data format="tabular" name="output_file" label="${vcf}" from_work_dir="tab.txt"> + <data format="tabular" name="output_file" label="${vcf}" from_work_dir="output.txt"> </data> </outputs> |