| Previous changeset 22:418dc4a1a5c7 (2018-12-11) Next changeset 24:f90250cf3169 (2018-12-11) |
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Uploaded |
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modified:
codon_usage.py codon_usage.xml |
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._.shed.yml ._codon_usage.py ._codon_usage.xml .shed.yml |
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| diff -r 418dc4a1a5c7 -r d5f3af031b16 ._.shed.yml |
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| diff -r 418dc4a1a5c7 -r d5f3af031b16 ._codon_usage.py |
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| Binary file ._codon_usage.py has changed |
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| diff -r 418dc4a1a5c7 -r d5f3af031b16 ._codon_usage.xml |
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| diff -r 418dc4a1a5c7 -r d5f3af031b16 .shed.yml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/.shed.yml Tue Dec 11 12:16:00 2018 -0500 |
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| @@ -0,0 +1,11 @@ +name: codon_usage +owner: gianmarco_piccinno +categories: + - Text Manipulation +description: RM-tool +long_description: | + RM-tool - dev +type: unrestricted +auto_tool_repositories: + name_template: "{{ tool_id }}" + descriptor_template: "Wrapper for Codon Usage application: {{ tool_name }}." \ No newline at end of file |
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| diff -r 418dc4a1a5c7 -r d5f3af031b16 codon_usage.xml --- a/codon_usage.xml Tue Dec 11 11:50:53 2018 -0500 +++ b/codon_usage.xml Tue Dec 11 12:16:00 2018 -0500 |
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| @@ -1,4 +1,4 @@ -<tool id="codon_usage" name="Codon Usage" version="0.1.1"> +<tool id="codon_usage" name="Codon Usage" version="0.2.0"> <description>for each sequence in a file</description> <requirements> <requirement type=“package” version=“3.6.0”>python</requirement> @@ -23,22 +23,12 @@ <option value="Standard">Standard</option> </param> - </inputs> - - <outputs> <data format="tabular" name="output" /> </outputs> - <tests> - <test> - <param name="input" value="fa_gc_content_input.fa"/> - <output name="out_file1" file="fa_gc_content_output.txt"/> - </test> - </tests> - <help> This tool compute codon usage of an annotated genome [preferably Prokaryotes]. </help> |