| Previous changeset 49:bd3036f7baf4 (2017-08-10) Next changeset 51:55c57fa3f679 (2017-08-10) |
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Commit message:
Uploaded |
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added:
GRsetFromGEO.R |
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| diff -r bd3036f7baf4 -r d793e03b4da1 GRsetFromGEO.R --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/GRsetFromGEO.R Thu Aug 10 06:19:14 2017 -0400 |
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| @@ -0,0 +1,16 @@ +require(minfi, quietly = TRUE) + +options(warn = -1) +options('download.file.method.GEOquery' = 'wget') +options('GEOquery.inmemory.gpl'=FALSE) + + +args <- commandArgs(trailingOnly = TRUE) +input = args[1] +output = args[2] + +GRset <- getGenomicRatioSetFromGEO(input) + +save(GRset,file = output) + + |