| Next changeset 1:25b94f589fc8 (2023-01-13) |
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Commit message:
planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__diversity commit 9023cfd83495a517fbcbb6f91d5b01a6f1afcda1 |
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added:
qiime2__diversity__alpha_group_significance.xml test-data/.gitkeep |
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| diff -r 000000000000 -r d941f15652f0 qiime2__diversity__alpha_group_significance.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/qiime2__diversity__alpha_group_significance.xml Mon Aug 29 19:38:39 2022 +0000 |
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| @@ -0,0 +1,73 @@ +<?xml version='1.0' encoding='utf-8'?> +<!-- +Copyright (c) 2022, QIIME 2 development team. + +Distributed under the terms of the Modified BSD License. (SPDX: BSD-3-Clause) +--> +<!-- +This tool was automatically generated by: + q2galaxy (version: 2022.8.1) +for: + qiime2 (version: 2022.8.1) +--> +<tool name="qiime2 diversity alpha-group-significance" id="qiime2__diversity__alpha_group_significance" version="2022.8.0+q2galaxy.2022.8.1.2" profile="22.05" license="BSD-3-Clause"> + <description>Alpha diversity comparisons</description> + <requirements> + <container type="docker">quay.io/qiime2/core:2022.8</container> + </requirements> + <version_command>q2galaxy version diversity</version_command> + <command detect_errors="aggressive">q2galaxy run diversity alpha_group_significance '$inputs'</command> + <configfiles> + <inputs name="inputs" data_style="paths"/> + </configfiles> + <inputs> + <param name="alpha_diversity" type="data" format="qza" label="alpha_diversity: SampleData[AlphaDiversity]" help="[required] Vector of alpha diversity values by sample."> + <options options_filter_attribute="metadata.semantic_type"> + <filter type="add_value" value="SampleData[AlphaDiversity]"/> + </options> + <validator type="expression" message="Incompatible type">hasattr(value.metadata, "semantic_type") and value.metadata.semantic_type in ['SampleData[AlphaDiversity]']</validator> + </param> + <repeat name="metadata" min="1" help="[required] The sample metadata." title="metadata: Metadata"> + <conditional name="__q2galaxy__GUI__conditional__metadata__"> + <param name="type" type="select" label="metadata: Metadata"> + <option value="tsv" selected="true">Metadata from TSV</option> + <option value="qza">Metadata from Artifact</option> + </param> + <when value="tsv"> + <param name="source" type="data" format="tabular,qiime2.tabular" label="Metadata Source"/> + </when> + <when value="qza"> + <param name="source" type="data" format="qza" label="Metadata Source"/> + </when> + </conditional> + </repeat> + </inputs> + <outputs> + <data name="visualization" format="qzv" label="${tool.name} on ${on_string}: visualization.qzv" from_work_dir="visualization.qzv"/> + </outputs> + <tests/> + <help> +QIIME 2: diversity alpha-group-significance +=========================================== +Alpha diversity comparisons + + +Outputs: +-------- +:visualization.qzv: <no description> + +| + +Description: +------------ +Visually and statistically compare groups of alpha diversity values. + + +| + +</help> + <citations> + <citation type="doi">10.1080/01621459.1952.10483441</citation> + <citation type="doi">10.1038/s41587-019-0209-9</citation> + </citations> +</tool> |