Repository 'fastq_collapser'
hg clone https://toolshed.g2.bx.psu.edu/repos/kaymccoy/fastq_collapser

Changeset 0:da107929c240 (2016-08-07)
Next changeset 1:6f69d63d8943 (2016-08-07)
Commit message:
Uploaded
added:
collapser 1.0.0.xml
b
diff -r 000000000000 -r da107929c240 collapser 1.0.0.xml
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/collapser 1.0.0.xml Sun Aug 07 10:33:41 2016 -0400
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@@ -0,0 +1,16 @@
+<tool id="fastq collapser" name="FASTQ Collapser">
+  <requirements>
+    <requirement type="package" version="0.0.13">fastx_toolkit</requirement>
+  </requirements>
+  <command>
+    fastx_collapser -Q 33 -i $input -o $output
+  </command>
+  <inputs>
+    <param name="input" type="data" label="Reads to collapse" />
+   </inputs>
+  <outputs>
+    <data format="fasta" name="output" />
+  </outputs>
+  <help>  
+</help>
+</tool>
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