| Next changeset 1:2d805c407c01 (2016-04-18) |
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Commit message:
Initial upload |
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added:
._Galaxy-Workflow-FastQC.ga Galaxy-Workflow-FastQC.ga repository_dependencies.xml |
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| diff -r 000000000000 -r da961688c6de ._Galaxy-Workflow-FastQC.ga |
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| Binary file ._Galaxy-Workflow-FastQC.ga has changed |
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| diff -r 000000000000 -r da961688c6de Galaxy-Workflow-FastQC.ga --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Galaxy-Workflow-FastQC.ga Mon Apr 18 21:41:23 2016 -0400 |
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| @@ -0,0 +1,64 @@ +{ + "a_galaxy_workflow": "true", + "annotation": "{\"refinery_type\": \"analysis\"}", + "format-version": "0.1", + "name": "FastQC", + "steps": { + "0": { + "annotation": "", + "id": 0, + "input_connections": {}, + "inputs": [ + { + "description": "", + "name": "Input Dataset" + } + ], + "name": "Input dataset", + "outputs": [], + "position": { + "left": 155, + "top": 389 + }, + "tool_errors": null, + "tool_id": null, + "tool_state": "{\"name\": \"Input Dataset\"}", + "tool_version": null, + "type": "data_input", + "user_outputs": [] + }, + "1": { + "annotation": "{\"html_file\": {\"name\": \"fastqc_report\", \"description\": \"HTML file containing FASTQC report.\", \"type\": \"html\"}, \"text_file\": {\"name\": \"fastqc_results\", \"description\": \"Data file containing FASTQC results.\", \"type\": \"txt\"}}", + "id": 1, + "input_connections": { + "input_file": { + "id": 0, + "output_name": "output" + } + }, + "inputs": [], + "name": "FastQC", + "outputs": [ + { + "name": "html_file", + "type": "html" + }, + { + "name": "text_file", + "type": "txt" + } + ], + "position": { + "left": 439, + "top": 330.5 + }, + "post_job_actions": {}, + "tool_errors": null, + "tool_id": "toolshed.g2.bx.psu.edu/repos/devteam/fastqc/fastqc/0.65", + "tool_state": "{\"__page__\": 0, \"contaminants\": \"null\", \"__rerun_remap_job_id__\": null, \"limits\": \"null\", \"input_file\": \"null\"}", + "tool_version": "0.65", + "type": "tool", + "user_outputs": [] + } + } +} \ No newline at end of file |
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| diff -r 000000000000 -r da961688c6de repository_dependencies.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/repository_dependencies.xml Mon Apr 18 21:41:23 2016 -0400 |
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| @@ -0,0 +1,4 @@ +<?xml version="1.0"?> +<repositories description="Stem Cell Commons FastQC workflow require FastQC tools"> + <repository toolshed="https://toolshed.g2.bx.psu.edu" name="fastqc" owner="devteam" changeset_revision="3fdc1a74d866" /> +</repositories> |