Repository 'samtools_flagstat'
hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/samtools_flagstat

Changeset 5:db17d5321bad (2019-07-29)
Previous changeset 4:4e404acfafa6 (2018-09-27) Next changeset 6:22970df7a40e (2019-09-06)
Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_flagstat commit ca0d1d44099fd21e0f8214102f4d8a2fd2d054d6
modified:
samtools_flagstat.xml
b
diff -r 4e404acfafa6 -r db17d5321bad samtools_flagstat.xml
--- a/samtools_flagstat.xml Thu Sep 27 09:01:18 2018 -0400
+++ b/samtools_flagstat.xml Mon Jul 29 08:48:13 2019 -0400
[
@@ -9,7 +9,8 @@
     <expand macro="version_command"/>
 
     <command><![CDATA[
-        samtools flagstat '$input1' > '$output1'
+    @ADDTHREADS@
+    samtools flagstat -@ \$addthreads '$input1' > '$output1'
     ]]></command>
 
     <inputs>