| Previous changeset 8:1d8fe9bc4cb0 (2019-05-28) Next changeset 10:65b93b623c77 (2022-02-03) |
|
Commit message:
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastp commit a64eb7904f80e90a5faff04ea3fb797ee1e07d36" |
|
modified:
fastp.xml macros.xml |
| b |
| diff -r 1d8fe9bc4cb0 -r dbf9c561ef29 fastp.xml --- a/fastp.xml Tue May 28 10:18:59 2019 -0400 +++ b/fastp.xml Tue Apr 21 16:45:20 2020 -0400 |
| b |
| @@ -1,4 +1,4 @@ -<tool id="fastp" name="fastp" version="@WRAPPER_VERSION@+galaxy1"> +<tool id="fastp" name="fastp" version="@WRAPPER_VERSION@+galaxy0"> <description>- fast all-in-one preprocessing for FASTQ files</description> <macros> <import>macros.xml</import> @@ -132,6 +132,10 @@ -l $filter_options.length_filtering_options.length_required #end if +#if str($filter_options.length_filtering_options.length_limit): + --length_limit $filter_options.length_filtering_options.length_limit +#end if + ## Low complexity filtering options $filter_options.low_complexity_filter.enable_low_complexity_filter @@ -251,6 +255,7 @@ <section name="length_filtering_options" title="Length filtering options" expanded="True"> <param name="disable_length_filtering" argument="-L" type="boolean" truevalue="-L" falsevalue="" checked="false" label="Disable length filtering" help="Length filtering is enabled by default. If this option is specified, length filtering is disabled."/> <param name="length_required" argument="-l" type="integer" optional="true" label="Length required" help="Reads shorter than this value will be discarded. Default is 15."/> + <param name="length_limit" argument="--length_limit" type="integer" optional="true" label="Maximum length" help="Reads longer than this value will be discarded. Default is 0 and means no limitation."/> </section> <section name="low_complexity_filter" title="Low complexity filtering options" expanded="True"> |
| b |
| diff -r 1d8fe9bc4cb0 -r dbf9c561ef29 macros.xml --- a/macros.xml Tue May 28 10:18:59 2019 -0400 +++ b/macros.xml Tue Apr 21 16:45:20 2020 -0400 |
| b |
| @@ -1,5 +1,5 @@ <macros> - <token name="@WRAPPER_VERSION@">0.19.5</token> + <token name="@WRAPPER_VERSION@">0.20.1</token> <xml name="adapter_trimming_options"> <section name="adapter_trimming_options" title="Adapter Trimming Options" expanded="False"> |