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dotplot_runner.xml |
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| diff -r a0b4bcf67972 -r dc2aed283637 dotplot_runner.xml --- a/dotplot_runner.xml Fri Jan 29 10:00:21 2016 -0500 +++ b/dotplot_runner.xml Fri Jan 29 10:14:36 2016 -0500 |
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| @@ -38,5 +38,25 @@ </test> </tests> <help> +**Running ProHits DotPlot** + +This runs the biclustering version of the DotPlot tool found at http://prohitstools.mshri.on.ca/. A more interactive version can be found at http://prohits-viz.lunenfeld.ca/. + +INPUTS: + +Saint Output: SAINTexpress generated "list.txt" file. + +Primary False Discovery Rate + +Secondary False Discovery Rate + +Maximum Spectral Count + +------ + +**Please cite** + + * Knight, J.D., Liu, G., Zhang, J., Pasculescu, A., Choi, H., and Gingras, A.-C. (2014) A web-tool for visualizing quantitative protein-protein interaction data. Proteomics, in press. PMID:25422071. + </help> </tool> \ No newline at end of file |